Pochonia chlamydosporia: VFPPC_09165
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Entry
VFPPC_09165 CDS
T09407
Name
(RefSeq) DNA replication factor C subunit Rfc2
KO
K10755
replication factor C subunit 2/4
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03030
DNA replication
pchm03410
Base excision repair
pchm03420
Nucleotide excision repair
pchm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFPPC_09165
03410 Base excision repair
VFPPC_09165
03420 Nucleotide excision repair
VFPPC_09165
03430 Mismatch repair
VFPPC_09165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_09165
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_09165
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_09165
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VFPPC_09165
DNA Replication Termination Factors
ELG1-RFC complex
VFPPC_09165
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VFPPC_09165
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VFPPC_09165
Check point factors
HRAD17(Rad24)-RFC complex
VFPPC_09165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_assoc_2
AAA_16
Mg_chelatase
SLFN-g3_helicase
AAA_28
DNAX_ATPase_lid
AAA_14
AAA_19
AAA_7
AAA_5
AAA_24
DUF815
ResIII
AAA_2
bpMoxR
RNA_helicase
AAA_30
AAA_3
nSTAND3
Motif
Other DBs
NCBI-GeneID:
28851742
NCBI-ProteinID:
XP_018140880
UniProt:
A0A179FDC0
LinkDB
All DBs
Position
6:complement(1306843..1308206)
Genome browser
AA seq
381 aa
AA seq
DB search
MASFFDLKARKAAAATNGSSDQKSHKPTETRNQPWVEKYRPKSLDDVTAQDHTVTVLQRT
LQASNLPHMLFYGPPGTGKTSTILALAKELFGPEMIKSRVLELNASDERGISIVREKVKN
FARMQLTNPAPGYKQKYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDQGNAKKRLEEIASAEGVALEDGAIDALIRCSEGDLRKAI
TFLQSAARLVGANAAKDGGDDEQMDVDKRPVAVKIVEDIAGVIPERTIGELVDAMRPRGV
GQTYRSVSKIVEDMVADGWSATQVVSQLYQALTTDETIADAHKNKIVMVFSEVDKRLVDG
ADEHLSILDLAMRISAILASK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccagtttcttcgatctaaaagcccgaaaggccgccgccgcgaccaatggctcttca
gaccagaaatctcacaaaccaaccgaaaccagaaatcaaccttgggtcgagaaataccga
cccaaaagcctcgacgatgtcaccgctcaagatcataccgtgaccgtcctccaaagaact
ctccaagcctccaacctccctcacatgctgttctacggtcctcctggcaccggtaaaaca
tccacaatcctcgcactcgccaaggagctattcggtcccgagatgatcaagtcccgagtc
ctcgagctcaacgcctccgacgagcgaggcatctcaatcgtccgagaaaaggtcaagaac
tttgcgcgcatgcaattgacaaacccagcccccggatacaagcaaaaatacccctgccct
ccattcaaaatcatcatcctcgacgaagccgactccatgacacaagatgcccagagtgcg
ctgcgacgaaccatggaaacatacagcaagattactcgcttctgcttaatctgcaattac
gtcacccgaatcattgacccgctggccagtcgttgcagcaagttccgattcaagagtctt
gaccagggcaatgccaagaagaggttagaggagattgcttccgcggaaggtgtagcgttg
gaagatggcgccattgatgctcttatccggtgtagtgagggcgatttgcgtaaagcgatt
acgttcctgcagagtgcagcgagattagttggtgcgaatgctgccaaggatggtggtgat
gatgagcagatggacgttgataagaggcctgtggctgtcaagattgttgaggatatagcg
ggtgttattccggaaagaacaattggtgagctggttgatgctatgcgtccgcgtggtgtg
ggacagacttatcgctctgtgtcaaagattgtggaggatatggttgcggatggatggagt
gcaactcaggtggtttcacagctttatcaagccctgacgacggacgagacgatagcagat
gcccataagaataagattgtcatggtcttttcagaggttgacaagaggctggtggatgga
gcggacgagcatctgtcgattctagatctcgcaatgagaatatcggccatcttagctagc
aaatag
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