KEGG   Pochonia chlamydosporia: VFPPC_09527
Entry
VFPPC_09527       CDS       T09407                                 
Name
(RefSeq) poly(A)+ RNA export protein
  KO
K14298  mRNA export factor
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VFPPC_09527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_09527
   03036 Chromosome and associated proteins [BR:pchm03036]
    VFPPC_09527
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VFPPC_09527
Chromosome and associated proteins [BR:pchm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    VFPPC_09527
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_EML WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 28852042
NCBI-ProteinID: XP_018139433
UniProt: A0A179F9E8
LinkDB
Position
7:complement(2163580..2164787)
AA seq 358 aa
MSGLFGAATSTAATNTVGDLKSDVALSDPPTDSISDLSFSPAPNGPDFLAVASWDNKVRI
YEIAQNGQSQGRHAYEHSQPVFSCDFSKDGTKVASAGADKNIKVCDLASQQDIIIGTHEQ
PARACRFFESSGSPMIVSGSWDKTIKYWDLRQQGQAAATVSCQERVYTMDVRDNLCVVGT
ADRYINVIDLRNPSKFYKTLQSPLKWQTRVVSCFTDSAGFAIGSVEGRCAIQYVEDKDSS
SNFSFKCHRDTAVNNVVNVHAVNDISFHPVHGTFSTSGSDGTFHFWDKDAKHRLKGYPNV
GGSITATKFNKNGSIFAYAVSYDWSKGYQQNTQSYPIKVMLHPVTNDECKPRPSMKKR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtctggactctttggagcggcgacgagcaccgcagcgaccaataccgtcggcgacctc
aagtcggacgtcgctctcagcgatcctcctaccgattccatctccgacctttccttttca
ccagctcccaatggcccggatttcctggccgtagccagctgggacaacaaggtccgaatc
tacgaaattgcccagaatggccagagtcaaggtcgacacgcgtacgagcactcacagcct
gtgtttagctgcgacttttccaaggacggcacaaaagtagcctcagccggtgccgataaa
aacatcaaagtttgcgatcttgcctcccagcaagacatcatcatcggaacccacgagcaa
ccagcacgggcgtgtcgattcttcgagagcagtggttcacccatgatagtatctgggtcg
tgggacaagacaatcaaatactgggacttgaggcaacagggccaagcggcggctactgta
tcgtgccaggagcgcgtatacaccatggacgtgagggacaacctgtgtgttgtaggaacc
gcagacagatacatcaacgtaattgatctgcggaacccttccaagttctacaagacgctc
cagagcccgttgaagtggcagacacgagtcgtcagctgcttcaccgactctgcaggcttc
gctattggtagcgtcgagggccgttgcgctattcagtacgtggaggacaaggactcaagt
tccaacttttctttcaaatgccaccgtgataccgccgtcaacaacgtcgtcaatgtccac
gccgtcaacgacatttccttccaccccgttcacggcaccttcagcacatctggttcggat
ggcacattccacttctgggacaaggatgcgaagcaccgtcttaagggataccccaacgtt
ggaggcagcattacagcgacgaagtttaacaagaatggtagcatctttgcttacgccgtt
agttacgactggagcaaggggtaccagcagaacacgcagagttatcctatcaaggtgatg
ctgcaccctgtgacgaatgacgagtgcaagccgcgaccttcgatgaagaagaggtag

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