KEGG   Pochonia chlamydosporia: VFPPC_09732
Entry
VFPPC_09732       CDS       T09407                                 
Name
(RefSeq) DNA mismatch repair protein msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    VFPPC_09732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_09732
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     VFPPC_09732
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_23 AAA_27 AAA_29 AAA_21
Other DBs
NCBI-GeneID: 28852211
NCBI-ProteinID: XP_018141190
UniProt: A0A179FE73
LinkDB
Position
6:complement(393587..397444)
AA seq 1231 aa
MAGEKSSAGTARTPARPAPKPAGSASASAKQRSIMSFFQKSSPTAASSPASRDKVSPDPQ
RSSCLQETTKANSLPKPKPSRKLSTPVPSSDALEPPSSQENADPVPSAAKTTSSALLSPT
TMTPSAASANDLTPKAMPESSPIRKVKAYVTPMAKKVVSYAESSEDEGPFNYGNRSQTRR
RGRARPAVKDEDDYDEDEAVSPDDDDDMGDFIASDDSDDRPQTKKRKRPAKSQTARKRSN
VSPPTHARSESPIRDPDDELMSDMPTTSTTSQWNYDPESTDKRPVTTPTERSTTKDPKRK
EKAYTKEPEDRYPWLANIRDKEKRAPSDPDYDPRTIFIPPMAWNKFSPFEKQYWEIKQNL
WDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQYK
VARVDQMETNLGKEMRERQDKSGKKADKVISRELSCVLTAGTLVDGSMLQDDMAAYCVAI
KESLIDDLPAFGIAFVDTATGRFQLSSFIDDIDLTKFETFVAQIGPRELLIEKSQLCTKA
LRILKNNTSPTTIWTHLKPGTEFWDADTSRRELKCGNYFSADETDEDGAWPEVLQEYKSD
DLVMSAVGALVSYLKFLQLERPLLSQGHFEKYSPIQKNGTLILDGQTLMNLELFSNSSNG
SSEGTLFSLLNKCITPFGKRLFRQWVAHPLCDIQRINERLDAVDMLNADSTVREQFASQL
VKMPDLERLISRIHAGACKPEDFVRVLEGFEQIEYTMSLLGAFKGGNGLVDRLISSMPDL
EEPLTYWKTAFDRRRAREDKILIPERGIEPDFDDSLDRMEEIKGQLSELLSEKKGELKCR
TLKFTDVGKEIYQMETPKSVKVPSSWRQMSATKDVKRWYFPHLTQLVRELQEAEELHSQL
VREIASRLFKKFDVDYNTWLLAIKIIAQLDCLVSLAKASNSLGQPSCRPQFLDEERSFVD
FEELRHPCMINTVDDFIPNDVKLGGDQAKINLLTGANAAGKSTVLRMSCVAVIMAQIGCH
VPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGT
SSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLATEFENHPEIRAKRMQIHVDDEERKVT
FLYKLEDGVAEGSFGMHCAAMCGISNRVIERAEVAARDWEHTSRLKESLEKAKTGCYIPL
GILSDIGSLLEGKGDIGDKGVDVLLKAIECL
NT seq 3696 nt   +upstreamnt  +downstreamnt
atggcaggtgaaaagtccagcgcgggcacggctcgtacccccgcgaggccggcacctaag
ccagctggctctgcttctgcatcggcaaagcagcgctccatcatgagcttcttccagaag
tcgtcgccaaccgccgcatcatcgcctgcctctcgtgataaggtctctcccgatcctcaa
cgttcctcatgtttgcaagagaccaccaaagccaactctcttcccaagccaaagccatca
aggaagctctcgacccccgtccctagcagcgacgcccttgagccgcccagctcgcaggag
aacgctgatcctgtaccgtccgccgccaagaccacaagcagtgctctgctttcaccgaca
acaatgacacccagtgcagcgtctgccaacgatctgaccccaaaggcgatgccagagagc
agtccaattcgaaaggtaaaagcatacgtcacgcccatggcaaagaaggtcgtcagctat
gccgaatcgtccgaagacgaagggccgttcaattatgggaacaggtctcaaactcgtcgc
cgtggtcgagctcgccctgcagtgaaagacgaagacgattatgatgaagacgaagcggtt
tccccagacgacgatgacgacatgggagattttattgcatctgatgattctgacgaccgc
cctcaaacaaaaaagcgaaagcgtccagcaaagtcacaaactgcccgaaaaagatccaat
gtttcgccaccaacacacgccagaagtgaatcgcccattcgagaccctgatgatgagcta
atgagcgacatgcctacgacatcaactacttctcaatggaattacgaccccgagtctacg
gataagcgccctgtcacaacacccacggagcgttccacgacaaaggaccctaagcgcaag
gagaaagcctacacaaaggaacctgaggatcgatacccctggttggccaacattcgtgac
aaggagaagcgcgctcccagtgatccggattatgatcccagaaccatcttcatcccacca
atggcctggaacaagttctcccccttcgaaaagcaatactgggagatcaaacagaacctg
tgggacacaatcgttttctttaaaaagggcaaattctacgagttgtacgagaacgacgcc
accattggccaccaggagttcgacttcaagatgactgacagagtcaatatgcgaatggtt
ggcgtcccagagagctctctggaccattgggtcaaccagttcattgcaaagcagtacaaa
gttgcaagggttgatcaaatggagacaaatctcggaaaggagatgcgcgaacgccaggat
aagagtggcaagaaggctgacaaagtcatctctcgtgaactgtcctgtgtgctcacagcc
ggtaccttggttgatggcagcatgctccaggacgatatggccgcatactgtgtcgcaatc
aaggagtccctcatcgacgacttacctgcatttggtattgctttcgtggacactgccact
gggcgctttcagttgtctagtttcattgacgacatcgatctcacaaagttcgaaacgttt
gttgcgcagattggccctcgggaacttctcatcgagaagtcccagctgtgcacgaaagcg
ttgcgcatcctgaaaaacaataccagtcccaccacaatttggacacatctgaagcctggt
actgagttctgggatgcagatacctctcgaagagaactgaaatgtggaaactatttcagt
gctgacgagactgatgaagacggtgcctggccagaggttttgcaagagtacaagagtgat
gacttggtcatgtctgctgtgggagcattggtgtcctacctcaagttcttgcagctggag
cgaccactcctgtctcagggacactttgagaagtacagcccaatccaaaagaatggtact
ttgattctggacgggcaaactttgatgaacctggaattgttttccaattcttccaatggt
agctcagaggggacattgttcagcttacttaacaagtgcataacacccttcggaaagcga
ctatttcgccaatgggtagcgcatccgctctgtgacattcaacggatcaacgaacggctg
gacgcagtggatatgctcaatgctgactcgacggttcgcgagcagttcgcatcccaactg
gtgaaaatgccagatttggagcgacttatctctcgtattcatgccggagcttgcaagcca
gaagacttcgtgcgagtgctggaaggtttcgagcaaatagaatatactatgagccttctg
ggagcattcaaaggaggaaatggcctcgttgaccgactcatttcgtcaatgcctgatctt
gaagagcccttgacgtactggaagacagcattcgaccgtcgcagggcgcgagaagacaag
atcttgatcccggaacggggtattgaacctgattttgacgacagcttggatcgaatggaa
gaaatcaaggggcagctgagcgaattactgagcgagaagaagggcgaactaaagtgccgg
acacttaaattcaccgatgttggcaaggaaatctatcagatggagacaccgaagagtgtc
aaggtgccgtcaagttggcgacaaatgtctgccacaaaggacgtgaagaggtggtacttc
ccacacctcacccagctggttcgggagcttcaggaggctgaggagcttcattctcaactg
gttcgggaaattgcatctcgactgttcaagaagtttgatgttgattataacacctggctc
cttgctatcaagatcattgcccagttggactgcttggtcagtttggccaaagcatcgaat
tcattgggacagccatcatgtcgaccccaattcctcgatgaggagcgcagttttgttgat
ttcgaggagttgcgacatccctgcatgatcaacactgttgacgatttcataccgaacgac
gttaagctcggtggcgatcaagccaagattaacttgttgactggagccaatgccgctgga
aagtcgactgtcctgcgaatgtcctgcgtggctgtgattatggctcaaatcggatgccat
gttcctgccgtatcggctcgcctaactccagtcgaccgcatcatgtcccgtcttggtgcc
aacgacaacatctttgctgcacagtccaccttcttcgtggagctttcggaaaccaagaag
atactttcggaagcgacaccacgctcactcgtcattcttgatgaactcggcagaggaact
agctcatatgacggcgtggctgtcgcccaagctgtgcttcaccatgttgcaactcacatt
gggtgtgttggcttcttcgcgactcactaccactcgttggccaccgagtttgagaaccat
cccgaaatcagagcgaagcgaatgcaaatccatgtggatgacgaagaacgcaaggttaca
ttcctgtacaagctcgaggatggtgttgctgaggggagttttggcatgcactgcgcggca
atgtgtggcatctcaaaccgcgtgatcgaacgagcagaggttgctgccagagactgggag
catactagccggttaaaggagagcttggagaaagccaagactggttgctatattcccctg
ggcatactgagcgatattgggagtctattagaagggaagggggacattggcgataaaggg
gtggatgtacttctcaaggctattgaatgcttgtga

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