Pochonia chlamydosporia: VFPPC_09881
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Entry
VFPPC_09881 CDS
T09407
Name
(RefSeq) DEAD/DEAH box helicase
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pchm03012
]
VFPPC_09881
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VFPPC_09881
Translation factors [BR:
pchm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
VFPPC_09881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_DHX29
OB_NTP_bind
Helicase_C
HA2_C
DEAD
RWD
UBA_DHX29
HA2_N
nSTAND3
AAA_22
ResIII
Cas3-like_C_2
dsRBD2
ATPase
MLLE_2
AAA_29
DND1_DSRM
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
28852341
NCBI-ProteinID:
XP_018141001
UniProt:
A0A179FDV4
LinkDB
All DBs
Position
6:959691..963801
Genome browser
AA seq
1350 aa
AA seq
DB search
MVKKGKAKAETSSQAAGPAGNNGTKGKKGQKTEAPAAPVPAAVPPKPTVKQIIGGSSWTG
KLPVNLLSEYCQKQRWEKPDYDTRKTPEGFSVWVTLSAKDPKTQQMTRLEAFKIPLSHKH
LILRDTALEAKHAAATYALFRVCSMQNKHTVLPPDHKSLWKEFQALKVQDLKDGKAWMYE
ADPFKALQERQEAKAAADKKRKELEQAKAKAKAMPGASGLVLLSNSGNDKGASFNPMKGW
TTAPKVEMGRQTRVQLEGLLRNGISWNPHGVRMQQSQKDTLVNELSKLGFRRSHIVEAVG
YCKDREETLEWLLIHVPEDDLPRWALPESYSAGVSIGSTNLKREGIIKSLSETGYSVELC
TRILDDNHGDESKAAEALQHILLSSSSTSGATNGDDDDGFLDLGSPEEQWEDEVASLEAM
YGENFRRESSELIQLKLESVKNAQSGEKGEVETYLQVRRPSSYPKHLIIAIMAKLPSYIK
LSIVRQALAYMEETLRDEPMKIYLVMDWIQQNINGIIDNPGNLVDISAVSSAASENRPRV
QGGRAKRARNTRPINWVPDPNSKEKWLRRQESSAWTDMLSKRQKLPAWQMRERIVKAVNE
NHVTIISGETGSGKSTQSVQFILDDLYGKGLGTCANMIVTQPRRISALGLADRVAEERCS
RVGEEVGYAIRGESRQSKDTRITFVTAGVLLRRLQTSGGRVEDVVASLADVSHVIIDEVH
ERSLDTDFLLNLIRDVMKSKKDMLKLILMSATLDAATFMNYFASEGLNVGCVEIAGRTFP
VDEYYLDDVIRMTGFSAETPDTGFITDESMGKIIQKLGHRINYNLIVEAVKAIDYELSYE
KKSGGILIFLPGVGEINHACNHLRSINSLHVLPLHASLETREQKRVFSKSPPGKRKVVVA
TNVAETSITIDDIVAVIDSGKVKETSFDSQNNMRKLEETWASRAACKQRRGRAGRVQEGR
CYKLYTENLERQMAERPEPEIRRVPLEQLCLSVRAMGMRDVARFLGRSPTPPDAQAIEGA
IKMLRRMGALDGDELTAMGQQLAMLPADLRCGKLMVFGAIFGCLDDCVTIAAILSTRSPF
MSPQEKREESRQARMQFFSGNGDLITDLEGFQAWDALMKDRVPQRQVRSFCDENFLSYQT
LSDISNTRSQYYEALTEIGIALRSRGPEVTPNATRNVQLIRALIASAFTPQIARIQYPDK
KYASSMSGAMELDPEARSIKYFNQENGRVFVHPSSTVFDSQGFSGNAAYMSYFSIISTSK
IFIRDLTPFNVFTLLLFSGPIELDTLGRGLLVDGWLRLRGWARIGVLVARLRGMVDDLIA
QKVENPGLDLGNDKVIRLVIKLIELNGLDA
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagggcaaagcgaaggccgagacgtcttcacaggcggcgggaccggctgga
aataatggaaccaagggcaaaaagggacagaaaaccgaagcacctgcagcgcctgtgccg
gcagctgtgccacccaagccaacggtcaaacagataatcggaggctcatcatggactggc
aagctcccggtcaaccttttgagcgaatactgccaaaaacagcggtgggagaaaccagac
tacgacaccaggaagacgcctgaaggattttcagtctgggtaacgttgagcgccaaggat
ccaaagactcagcaaatgacacggttggaggctttcaagattccccttagccacaagcac
ctgattctacgagataccgcccttgaagcaaagcatgctgcggcgacgtatgcgttgttt
agagtttgcagcatgcagaacaagcatacagtgctgccaccagaccacaaatctttgtgg
aaggagtttcaggcactgaaagtgcaggacttgaaggatgggaaggcgtggatgtatgaa
gccgatccgttcaaggcacttcaggaaagacaggaggccaaggctgcggccgacaagaaa
cgaaaggagctcgagcaagccaaggcgaaggccaaggcgatgcccggtgcgtcgggctta
gtgctgttgagcaattcgggtaatgataaaggcgcttcattcaatccaatgaagggttgg
actacggcaccaaaggttgagatgggcaggcagactagggtgcagctggaaggactcctt
cgaaatggaatttcctggaatccgcatggcgtgaggatgcaacaaagccagaaagacaca
ctggttaatgaactcagtaaattgggattcagacggagtcatattgtcgaggcggtaggg
tactgcaaagatcgggaggaaactctggaatggctattgatccatgtgcctgaagatgat
ctaccacgttgggctttgcctgagagttactctgcgggtgtttctatcggatctaccaac
ttaaaacgagagggtattatcaaatctttgtcggaaacggggtactctgttgagttgtgt
accagaatcctcgatgacaatcacggagatgagagcaaagctgccgaggccttgcaacac
attctactctcttccagctctactagcggtgcaacgaatggtgacgatgatgacggtttt
cttgacctgggttcaccggaagagcaatgggaagacgaagtggccagtttggaagccatg
tatggtgaaaattttcgccgcgaatctagtgaactgattcaactgaagcttgaatctgtc
aaaaatgctcagagtggcgaaaaaggcgaagttgagacgtatctgcaagtcagaagaccg
tctagctatccgaagcacctcataatagcgattatggcaaagctgccgtcgtatatcaag
ctcagcattgttagacaagccttggcgtacatggaggagactttacgggatgagcctatg
aaaatctatcttgttatggactggattcaacagaatatcaatggcatcatcgataaccct
ggaaatttggttgatatttcagccgtttcatcagcagcttcggagaaccgaccccgggta
caaggtggccgagcaaagagggctcggaatactcgtcctatcaactgggttccggatccc
aatagtaaggagaagtggcttaggcgccaggagagctccgcctggacagatatgttgtcg
aaacgacagaagcttcctgcctggcagatgcgcgaacgtattgttaaggcggtcaatgag
aatcatgtgaccattataagtggtgagactggttctggtaaatctacgcaatctgtgcag
tttattctggacgatctttacggcaaaggactgggaacatgtgccaatatgattgttacg
caaccgcgtcgaatttcagccctgggtcttgcggatcgtgtggcagaagaacgttgctca
agagtcggagaggaagttggttacgccattcgaggagaatctcggcaatccaaggacacc
aggatcacgtttgtgacggctggtgtgttgctgcgacgactgcaaacgtctggtgggcgg
gtggaagatgtggttgcatcgttggccgatgtcagccatgttatcattgacgaagttcac
gagcggagtcttgataccgactttttactcaacttgatccgtgacgtgatgaagagcaag
aaggacatgctgaagcttattctcatgtctgctacacttgatgcagctacatttatgaac
tactttgcttcggaaggattgaatgtcggatgcgttgaaattgcaggcagaacattccca
gtggatgagtattatctggacgatgtcatacgaatgacaggattcagtgctgaaacacca
gacacgggctttatcacggatgagtccatgggcaaaattatccagaagcttggccacagg
atcaactacaacctgatagtggaggctgtcaaagccattgactatgaactgtcctacgaa
aagaagtcgggcggtatattgatcttccttcctggtgttggtgagattaatcacgcctgc
aatcatttgcgatccatcaactcgctgcatgttttacccttgcacgcgtctctggagacg
agggagcaaaagagagtcttttccaaatcaccgccaggaaaacgaaaagttgtggtagcc
acgaatgtggcggaaacgtccatcaccatcgatgatattgttgccgttattgatagcggt
aaagtcaaagagactagctttgactcccaaaacaacatgaggaagcttgaggaaacttgg
gcgtcacgggcggcttgcaagcaacgccgtggacgtgctggtcgtgttcaggaaggcaga
tgctacaagctgtacacggagaacctggaacgacaaatggctgagcgacctgaacctgaa
atcaggcgtgtgccactggagcagctctgtctttctgtccgggccatgggaatgcgtgat
gttgccaggtttctgggacgatcaccaactcctccagacgcgcaagccatcgagggtgcc
atcaaaatgctgaggcgcatgggtgcgttggacggggacgagctcactgccatgggacag
cagcttgccatgttgccggccgatctccgatgcggcaagttgatggtgtttggagctatt
ttcggctgcttggacgattgcgtcacgattgcggcgattctcagtaccagaagcccattt
atgtcgccgcaagagaaacgagaagagtcaagacaagcacgtatgcaattcttcagcggc
aacggcgatctgattaccgacctggaggggttccaagcgtgggatgccttgatgaaagac
cgagtgccccagagacaagtgaggtcattttgcgatgagaatttcctgtcgtaccaaacg
ctctccgatatttcaaacaccaggtcacagtattacgaagcattgactgagattggaatt
gccctccgatccagaggccccgaagtgaccccaaatgcaacccgaaatgtgcaactaata
cgtgccttgatcgcctccgcatttacacctcaaatcgccaggatacaatatcccgataaa
aagtacgccagctccatgtccggcgcaatggagcttgaccccgaggcgcggtcgatcaag
tattttaaccaagagaacgggagggtgtttgtgcatccaagcagcaccgtgtttgacagc
caagggttctcaggaaacgcagcgtacatgtcgtactttagtatcatttccaccagcaag
atctttatccgagacctgaccccatttaatgtgtttacgctgttgttattctcggggccg
atagagctggataccttgggccgtggactgctggtagatggatggctgagacttcgtgga
tgggcacgcattggcgtcttggtggctagattgagggggatggtggatgacttgattgcg
caaaaggttgagaatccggggttggacttgggtaatgataaggttattaggttggtgata
aagctgatagagttgaatgggctggatgcatag
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