Pochonia chlamydosporia: VFPPC_11074
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Entry
VFPPC_11074 CDS
T09407
Name
(RefSeq) paired amphipathic helix repeat domain-containing protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
VFPPC_11074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_11074
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
VFPPC_11074
REST complex
VFPPC_11074
Heterochromatin formation proteins
Other heterochromatin formation proteins
VFPPC_11074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
28853336
NCBI-ProteinID:
XP_018140197
UniProt:
A0A179FB24
LinkDB
All DBs
Position
6:complement(3196163..3201126)
Genome browser
AA seq
1451 aa
AA seq
DB search
MNNQNLHGRSGGPPYDRDREMDDRHRAMQQHEDMRRDQERERERERDREREQADRYQQGP
GVPHQSSAGSIPIHQPVASRIPGAIHSPGGLLANHSGNPPPPGASLGAPSGPVNFGGPLQ
QSGAASQQHQMYAPIGHSQAPPSAGQPAPASAAGFGGPQAQQQPGQQDRGAAAKGAAAIV
GVTPGGHQIPGGITQGQQPILNDALTYLDQVKVQFHDQPDVYNRFLDIMKDFKSQAIDTP
GVINRVSELFAGHPNLIQGFNTFLPPGYRIECGAGNDPNTIRVTTPMGTTVQSIAGRGQG
EHGGPGMSQPLFPERGSQWQQQQPPQSQQQQQQQRSQHSIESPEANFSTPVQNGASLFVQ
AAAQSGAFDAPGSSQRNAAQGQPGAANAPGSRQTPGPTSGPGGANVGAGNQANMERRGPV
EFNHAISYVNKIKNRFQDKPEIYKQFLEILQTYQREQKPIQDVYAQVTTLFNAAPDLLED
FKQFLPESAGQAKATPGRGDDGAPAGPSHTPQPGGQKMPPLGSFAPPPSASKDNKKRPRG
DKQAAVAEAALPETNAVNRLQQSVVNGTGKRTKVSHARATGDPSTIEPTLTPVMPEPYPP
RPSATSNQEEIAFFERVKKFLSNRSSMNEFLKLCNLFSQGIIDRNTLFHKGALFIGANPD
LMTFWKTFVGVDSQDVVIENQPAPPTEKLSLSNCRGYGPSYRLLPKRERLKPCSGRDELC
HSVLNDQWASHPTWASEDSGFVAHRKNQFEEGLHRIEEERHDYDFNIEANLKCIQLLEPI
AQQMLAMSAAERESFHMPAALAGQSTSIFKRICKKIYGERGIDVVNDMYSHPFDVVPVLL
ARMRQKDEEWRFSQREWEKVWHAQTENMHLKSLDHMGILVKSTDKRNLTAKHLVDVIKTK
HEEQRRERALKGKAPRHQLVWDFNNKQVILQLLRLMMLYSMHNGQHSTQEKERILDFFET
FVPAFFDLPEEMYQDKLPKMQPDSGEDDNEDSTPAELTNGRSRRNGKKGDLLRGVLDPVR
NGSKPRSQKEDSAASGSKETTPDVTSANEEEMGDAPEEAAVPEVSNERWMPTIPKPVVVG
GDNALLDEGGELKADGFFTRPWYNFFCNQTIYVFFNIFQTLYNRLLDIKESHELVSQAIE
RLNRPKPARDIGFTENHMTFFEPTDDPEMFWPKTVELIEEYITGEVDENRYQDVLRHYYL
KNGWKLYTIQDLLKTLCRLALTCSSTDAKEKTPDLIHQYLTSREKEETSYQTEISARKFA
EKCVKDGDIFVICWFPQKNEATVRWLQRDETTFYMDEMQVRERWQYYISSFIRVEPTEGI
PRSRLQKVVLTRNLPSGDTDSDSDEVPKPLSYNESLTTSICLKSSKMVWGPGTSEYFIYD
QSPKTQEERERREKFTKALSAHRESKLVEKMVHNPSWTKDMSPEEVQEQNKNFRKWMDDG
VAPPGGDVEMD
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccagaacctccacgggcgcagtggtggtccgccgtacgatcgcgatcgcgaa
atggacgaccgacaccgcgccatgcagcagcacgaagatatgcgccgtgaccaagagcga
gagagagaacgcgaacgcgaccgggagagagaacaagccgatcggtaccagcagggtcct
ggggtgcctcatcagagcagcgctggctccatcccgattcaccagcctgtggcatcgcgg
atcccgggtgctatacacagtccggggggtctgcttgcgaatcatagtggcaacccgccg
ccgcctggtgcttctctgggcgcgccgtcggggcctgtcaattttgggggtcccctccag
cagagcggtgctgcgtctcaacagcatcagatgtatgcgccgattgggcattcgcaagct
cctccgagtgctgggcagccggccccggcttcggctgcgggatttggcggccctcaggca
cagcagcagcctggacagcaggatcgcggagcggcagctaagggagctgcggcgattgta
ggcgtgacgcctggcggacatcagattccgggggggatcacacagggccagcagccgatt
cttaatgatgcgttaacctacttggaccaagtcaaggtccagtttcacgaccagcccgat
gtttataacaggttcttggacattatgaaagatttcaagagtcaagccattgatacaccg
ggcgtcattaaccgggtctcggagctgtttgctgggcatcctaacctcattcagggcttc
aacacctttctgcctcccggctacaggattgagtgcggcgccggaaacgatccaaacacg
attcgagtgacaactccgatgggcactaccgtacagtccatagctggacgtggtcaggga
gaacatggtggccctggtatgagccagcctctatttccagagcgcggcagtcaatggcag
caacagcagccgccgcaatcacaacaacagcagcagcagcaacgctcgcaacatagcatt
gagagccccgaggcgaactttagcacgcctgtacaaaacggagccagtctctttgttcag
gccgcagcccaaagcggcgcgtttgatgcccctggctcttcgcaaagaaatgcggctcag
gggcaacctggtgctgccaacgcgcccgggtcaagacagaccccaggtccaacatcagga
ccgggaggagccaatgttggcgcaggcaaccaagccaacatggagcgccgcggtcctgtt
gagttcaatcacgccattagttatgtcaacaaaatcaagaaccgctttcaggataagccc
gagatctacaaacaattcctcgagatactccaaacttatcagcgggaacagaagcctatt
caggatgtgtacgctcaggtcacaactctgttcaatgctgcgccagacctgcttgaagac
ttcaaacagttcctacccgagtctgcgggacaggccaaggcgactcccggccgtggtgat
gatggcgctcctgctgggccaagtcacaccccccagcctggcgggcaaaagatgcctccg
ctgggcagctttgcgcctccgcccagcgccagcaaggacaataagaaaagacctcgcggt
gacaagcaggctgctgttgctgaagcggcccttcccgagacaaatgctgtgaatcgactt
caacaaagcgttgttaatggcaccggcaagcgaacaaaagtcagtcatgccagggctacc
ggagatccttcaactatcgaacctacgctcactccggttatgcctgagccgtatccccct
cgtccatctgccacgtccaaccaggaagaaatcgccttcttcgaacgggtgaagaaattc
ctcagcaaccgatcgtcgatgaacgagtttttgaagctttgcaatcttttcagccagggg
atcattgaccgaaatactctgttccacaagggcgctctgttcatcggagccaacccagac
ctgatgacgttttggaagacgtttgttggcgtggactctcaggatgtcgtcattgagaat
cagccagcacctcccacggagaagctgtcgctcagtaattgccgaggatacggccctagc
tacagacttcttcccaagagagagcgcttgaagccctgcagtggccgcgacgagctgtgc
cactcggttctcaatgaccagtgggcgtcccacccaacctgggctagtgaggattctggc
tttgtagctcaccgtaagaaccagttcgaagagggccttcacaggattgaagaggaacgc
catgattatgacttcaacatcgaggccaatcttaagtgtattcagcttctggaaccgatt
gcgcagcagatgcttgccatgtcagccgcggagagagagtctttccatatgcctgcggca
cttgctggccaaagcacgtcaatattcaagagaatctgtaagaagatttacggtgagagg
ggtatcgatgtcgtcaatgacatgtacagccacccctttgacgtggtgccagtcctgctg
gcccgcatgagacagaaggacgaggagtggcgcttctcgcagcgcgaatgggagaaggtc
tggcatgcgcagacggagaacatgcacctcaagagcctggatcacatgggcatcctcgtc
aaatctaccgacaagcggaacctcactgccaagcacctggttgatgtcatcaagaccaag
catgaggagcagcgccgtgaacgtgctctcaaaggcaaggctcctcgtcaccagttggtt
tgggactttaacaacaagcaggtcattctgcagctgctccgcctgatgatgctctacagc
atgcacaacggacagcacagcactcaggagaaggagagaattttggacttttttgagacg
ttcgtcccagcattctttgaccttccggaagagatgtatcaggacaagctaccgaaaatg
caaccagattccggcgaagatgataacgaggactctactcctgctgagctgacgaacgga
cgaagccgccgtaatggcaagaaaggggacctacttaggggagtattggaccccgtgcgc
aacggcagcaagcctcgcagccagaaggaagatagtgccgcctctggaagcaaggagacc
actcctgatgtcacgtcggccaatgaggaggagatgggcgatgcgcccgaggaggctgcc
gtgccagaagtctcaaatgagcggtggatgccaaccatccctaagccggttgttgttggc
ggcgacaatgctctccttgacgaaggcggcgagttgaaagcggacggcttcttcacgcgg
ccctggtacaacttcttctgtaatcagaccatttacgtcttctttaacatcttccagacg
ctctacaaccgcctgctggacatcaaggaaagccacgagcttgtttctcaagcgattgag
cgtcttaacagacccaagccagcgagggacattggcttcactgagaaccacatgacgttc
tttgagccgaccgatgaccccgagatgttttggcccaagaccgtggagctgatagaggag
tacatcaccggcgaggttgacgagaaccgctaccaggatgtgttgcgccactactacctt
aagaacggatggaagctgtacactattcaggatctcctcaagacgctgtgccgactggct
ctgacctgcagcagcactgatgccaaggagaagacgcccgacctgatccatcagtatctg
actagccgggagaaggaggagaccagctaccagacggaaatctcggcgcgaaagtttgca
gagaagtgcgttaaggacggcgacatttttgtcatttgctggttcccacaaaagaatgaa
gcgacggttcgttggctgcagcgcgacgaaacgacgttttacatggacgagatgcaggtc
cgcgagcgttggcaatattacatctcatcattcatccgggttgaacccacagagggcatc
ccccgctccagactgcaaaaggtggtcttgacgagaaatctgccgtccggtgacaccgac
tccgattcagacgaagtccccaagcctctgtcatacaatgagagtctaacgaccagcatc
tgtctcaagagctcgaaaatggtctggggccccggtacatccgagtacttcatctacgat
cagtccccgaagacgcaggaggagcgggagcgccgagaaaagttcacaaaggcgctcagc
gcgcaccgcgaaagtaaactcgttgaaaagatggtgcataacccctcatggaccaaggac
atgagtcccgaagaagttcaggagcagaataagaactttcgcaagtggatggatgatggg
gttgcgcctccgggtggggacgttgagatggattag
DBGET
integrated database retrieval system
