Pochonia chlamydosporia: VFPPC_11954
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Entry
VFPPC_11954 CDS
T09407
Name
(RefSeq) alpha-1,2-mannosyltransferase (Alg2)
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03440
Homologous recombination
pchm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VFPPC_11954
03460 Fanconi anemia pathway
VFPPC_11954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_11954
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
VFPPC_11954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
28853981
NCBI-ProteinID:
XP_018146160
UniProt:
A0A179FX37
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All DBs
Position
2:279300..281384
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AA seq
694 aa
AA seq
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MSPDVIDLISSSPPRSAISTEPPRRTVFPSVSTGSSRRRSLKPRDSTPSPSRRLLGRCQT
QPSSVRPCQTAQGFDEIDDFNDDLADSVFDLLDDWQAKRRRTHEEDGEDTCLRTAAPSIS
KSSLPLKVRDGRCRNTKAALEPIELTSPADWPSPSEKPVNISQPLSSLPSITADKTANPA
TAGQIAPLASDPFASSPLRPVNRRKAGTRASSVDILSSSSPLRTTSYRIRTTGDNRGMKC
NRSNLPAKSSVDLTVEYNNITRRGAVPDGPTPKEAAWPTVSKDLISIDGSDSLSDISDEL
PAITDMDVSKRRARSPLRRSQSDLTSARPKTSHAPAVARKATTALAREAEKSRKRRERDE
AKAIKVAEKQRIAALTEVNKLRTDKKVSAPEMIVDLPSGLGLELQVPTQELLQGLGVQYC
TWNCPEHRIVKWRRKVTCKFNNDICLWEPVPLHIVDEGIAVLILTAEEFVAIARENSLAD
HVADIKTRYGDLNFMYILQGLTLWLRKNRSNRNRQFTSNVRSANEVALSSSSRARTEHVS
EDLIEEALLGLQVEHGRLIHHTAVASETARWIINFTQHVSTIPYKKQRDQATSAAGFCMD
SGQVRTGDSAQDTYVRMLQEIVRVTAPIAYGIATEFDSVTKLVDGLEQGGPTRLDAVRKS
TNKDGAVSDRTIGQAISRRMHKVFTGRDEESTNV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagatgtaattgatctcatttcctctagtcctccacgctccgccatcagcaca
gagccgccgcggcgaactgtcttcccgtccgtctccacgggatcctcacggcgacgaagt
ttgaagccaagggattcaaccccatccccaagccgaagactgctaggccggtgtcagacc
cagccttcatctgttcgtccatgtcagaccgcacaaggctttgatgaaattgacgacttt
aacgacgacctcgccgacagtgtctttgatctgctcgatgattggcaagcaaaacgcaga
cggactcatgaagaggatggtgaggacacatgtttgagaacagctgcgcctagcatctcc
aagtcctcgctacctttgaaggttcgagatggtcgttgtcggaatacaaaagcagctcta
gaacccatcgagcttacaagccccgcggactggccatcaccgagtgagaaacccgtcaat
atcagccaaccattgtcgtcgctgccatccatcaccgcagacaagactgcaaatccagca
actgcaggtcagattgcacccctggcatccgatccttttgccagctcgcctcttcgccct
gtcaataggcgcaaggcgggtaccagagcttcgtccgtcgacatcttgtccagctcatcc
ccactgagaacgacgtcatatcggattcgaaccactggcgacaacagaggcatgaaatgc
aatcgatctaacttgccagccaaaagttctgttgacctgacagtcgaatacaacaatata
acaaggcgcggtgcagttcccgatggcccaacacccaaagaggctgcctggcccacggtt
tcaaaggacctaatcagcattgatggctccgactcgctaagcgacattagcgatgaatta
ccagccatcacggacatggatgtgtccaaacgccgcgccagatcaccactgcgacgttcg
cagagtgacttaacgtcggccaggcccaagacttcccatgcacccgccgtggccaggaaa
gcaacaacggctcttgctcgggaggcggagaagtcgagaaagcgtcgggagcgagacgaa
gccaaagccatcaaagttgctgaaaaacaacgcattgccgccttgacagaagtgaacaag
ctccgcacagacaagaaagtatctgcaccagaaatgattgtggacttaccgtctggcctg
ggcttagagttgcaggttccgacccaggaattgctacaagggcttggtgtgcagtactgc
acatggaattgtcctgagcacaggattgttaagtggcggagaaaggtgacatgtaaattc
aacaacgatatttgcttgtgggagcccgtccctttgcatattgtggacgagggcattgcc
gtcttgattcttacggcggaagaatttgtcgcaatagcgcgggagaactccttggcggat
catgtcgctgatatcaagacccgttatggcgacctgaattttatgtatattcttcaagga
ctaactctttggcttcgtaagaatcgcagcaatcgaaaccgacagtttacttctaatgtt
cgatctgcaaatgaggtcgcgctgtcgtcatcgtcccgtgcaagaacagaacacgtttcg
gaagaccttattgaagaggcattgctgggtcttcaggtggaacatggcaggctcattcat
catacagctgtggcgtctgagacagccagatggataattaactttacgcaacatgtgtcg
acgattccgtacaagaagcagagagaccaggcgacttctgccgctggattttgcatggac
agtggtcaagtacggacaggagacagtgcccaagacacatacgttcggatgctacaagag
attgtgcgggtaacggccccgattgcatatgggattgcaactgaatttgacagcgtcacc
aaacttgtggacggcttggaacaaggaggcccaacaagactagatgctgtgaggaagagc
acaaacaaggacggcgccgtttctgatcgaacgattgggcaggcaataagtcgaagaatg
cacaaagtgtttaccggaagagatgaggaaagtacaaatgtatga
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