Pochonia chlamydosporia: VFPPC_12701
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Entry
VFPPC_12701 CDS
T09407
Name
(RefSeq) E3 ubiquitin--protein ligase pub1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04011
MAPK signaling pathway - yeast
pchm04120
Ubiquitin mediated proteolysis
pchm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VFPPC_12701
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
VFPPC_12701
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VFPPC_12701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_12701
04121 Ubiquitin system [BR:
pchm04121
]
VFPPC_12701
03029 Mitochondrial biogenesis [BR:
pchm03029
]
VFPPC_12701
Enzymes [BR:
pchm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
VFPPC_12701
Membrane trafficking [BR:
pchm04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
VFPPC_12701
Ubiquitin system [BR:
pchm04121
]
Ubiquitin ligases (E3)
HECT type E3
VFPPC_12701
Mitochondrial biogenesis [BR:
pchm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
VFPPC_12701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
PKC_C2
RDM3_C
Motif
Other DBs
NCBI-GeneID:
28854472
NCBI-ProteinID:
XP_018148168
UniProt:
A0A179G2J7
LinkDB
All DBs
Position
1:complement(716404..719388)
Genome browser
AA seq
823 aa
AA seq
DB search
MSARTESGLPSKPNLRVTIIAADGLYKRDVFRFPDPFAVATINGEQTKTTTVSKRTLNPY
WNESFDFRANEGSILAVQVFDQKKFKKKDQGFLGVINIRVGDVIPDLGPDSDDQMLTRDL
KKSTDNLVVHGKLIINLSCNLSTPARGGQASSSRPALTVPGASSSSALSAPDGRPSSSMS
NQNGIPPGPQLTLPHHPPLVSSNSTPAPAVNGSSSSRPTSQLSPFEDNQGRLPAGWERRE
DNLGRTYYVDHNTRTTSWNRPTANGGAETREREAATAVERQRHQNRTLPEDRTGTSSPTP
SQQQQGGSQPGGGSPTGPSSPSNANANTTVMHTGATSPGTGELPPGWEQRWTPEGRPYFV
DHNTRTTTWVDPRRQQYIRMYGGQNNTNGQIQQQPVSQLGPLPSGWEMRLTNTARVYFVD
HNTKTTTWDDPRLPSSLDQNVPQYKRDFRRKLIYFRSQPAMRILSGQCHIKVRREHIFED
SFAEITRQSATDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNY
TLQINPHSGINPEHLNYFKFIGRVVGLAIFHRRFLDAFFIGALYKMVLGKAVALADMEGV
DADFHRSLQWMLDNDISGGILEQTFSTEDERFGVMTTEDLIPNGRNIEVTNENKKEYVDL
MVKWRIEKRIAEQFQAFKEGFHELIPQDLINVFDERELELLIGGIAEIDVDDWKKHTDYR
GYTESDEVIQNFWQTVRSWDGEQKSRLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKTG
ELTNLPKAHTCFNRIDLPPYKTLETLQQKLTIAVEETMGFGQE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgcactgaatcggggcttccaagcaagccgaaccttcgcgtcaccatcatt
gccgcggatggcctatacaagagagatgtttttagatttcccgatcccttcgccgtggcg
accatcaatggcgaacaaaccaagaccaccaccgtcagcaagcggacgctgaacccatac
tggaacgaaagttttgactttcgagcaaatgagggcagcatcttggcagtccaagtattc
gatcagaagaagttcaaaaagaaggaccaagggttccttggtgtcatcaatatcagggtt
ggagatgtcataccggatcttggccccgactctgacgaccagatgctcacgagagatctc
aaaaagtcgaccgataatctcgtcgttcacggaaaactcatcatcaacctctcatgtaac
ctgagcactccagcacgtggcggacaggcatccagcagtcgacctgccctaaccgttccc
ggtgcatccagctcgtctgcactatctgcacctgatgggagacctagctcatccatgtca
aaccagaatggtattcctcctggtcctcagctgactttgccccatcatccgcctcttgtc
agctcaaattctacacctgctccagctgtcaacggctcgagttcgtcacggccgaccagc
caattgagtccttttgaggacaaccaaggtcgacttccagctggctgggaaagacgagaa
gataacctaggacgaacatactacgtcgaccacaacacacgcacaactagctggaatcgc
ccgactgccaatggcggcgccgagacccgagaacgggaagccgctacagcagtcgaacga
cagcggcatcagaatcgtactctgcccgaagacaggacaggcaccagctcgccgactccg
tcgcagcagcagcagggtggttctcagccaggaggcggtagtccgactggccctagcagc
ccttccaatgccaacgccaacacaacggtcatgcacaccggtgccaccagtcctggcacg
ggagaactaccaccaggatgggaacaaagatggacgcctgagggccgtccctatttcgtt
gaccacaataccagaacaaccacttgggttgacccgcgtcgtcagcagtatattcgaatg
tatggcggccaaaacaatacgaatggtcaaattcaacagcaacccgtgtcacagctgggt
cccctgccaagcggatgggaaatgcgactcactaacacggctcgcgtgtactttgtcgac
cataacaccaagacgaccacgtgggatgatccccgtctgccttcatccctggatcaaaac
gtacctcaatataagcgagacttcagacgcaagctcatctatttccgatctcaacccgct
atgcgcatcctcagtggtcaatgccacatcaaagtccgtcgcgagcacattttcgaggat
tcttttgctgagattacacgtcaatccgccacggacttgaagaaacgattgatgatcaag
tttgacggagaagatggtttggattacggtggtctgtctcgagagttcttcttcctgttg
tctcacgagatgtttaacccattctactgccttttcgaatactctgcgcacgataattac
actctgcagattaacccccactccggcatcaaccccgagcacttgaactatttcaagttc
attggacgtgtggttggcttggccattttccatcggcggtttttggatgccttctttatt
ggggcgctctacaagatggttctgggcaaggctgtcgcccttgctgacatggaaggtgtt
gatgctgatttccatcggtctctacagtggatgctggacaacgacatttctggcggaatt
ttggagcagactttttctactgaagacgaacgatttggtgtcatgacgaccgaggatttg
atccccaacggccgaaatatcgaggtcaccaacgaaaacaagaaggagtatgttgatctc
atggtgaaatggcgtattgagaagcgtattgcggagcagttccaagcattcaaggagggc
ttccacgagctcattcctcaggatctcatcaatgtgtttgacgaacgtgaactcgagttg
cttattggtggcattgctgagattgatgtggacgactggaagaagcacacggattacagg
ggatacactgagtcggatgaggttatccagaacttctggcagacagttcgatcatgggat
ggggaacaaaagtcgcgtctcctgcagttcaccacgggaacttctcgcattcccgtcaac
ggcttcaaagatcttcagggaagtgatggtcccaggcgattcaccattgagaaaacagga
gagctcaccaacctacctaaagcacacacttgcttcaaccgtatcgacttgcctccttat
aaaacactggagacgttgcaacagaagctgacgatagctgtggaggagacaatgggattt
ggccaagagtaa
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