Pochonia chlamydosporia: VFPPC_12709
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Entry
VFPPC_12709 CDS
T09407
Name
(RefSeq) formin binding protein (FNB3)
KO
K12821
pre-mRNA-processing factor 40
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_12709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_12709
Spliceosome [BR:
pchm03041
]
Complex A
U1 snRNP components
U1 related factors
VFPPC_12709
Complex B
VFPPC_12709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
WW_2
FIMAH
Motif
Other DBs
NCBI-GeneID:
28854480
NCBI-ProteinID:
XP_018148230
UniProt:
A0A179G313
LinkDB
All DBs
Position
1:complement(<877474..>880209)
Genome browser
AA seq
826 aa
AA seq
DB search
MSGYGGPAAAAWQEHHTPDGRAYYYNSATKVTQWTKPDDLMTPAERALSSQPWKEYTAEG
GRKYWYNTETKQSSWEMPDAYRNAMGQSGGQPSYGQNGGHSHSSYEHPRESRDHRDPRDQ
RDQRDFSGPDSRYGGYGNESRAQAFIPAASDEPEYASPEEAEAAFVKLLKRCGVQPDWTW
EDAMRATIKDPQYRSIRDAKGRRDAFDKYCQDVIVQDRERADERMAKLRADFETMLKRHP
EIVHYTRWKTARPMIEGETIFRSTNNEEERRQLFEEYVVGLKKAHKERQIKDRKNALDSL
KDLLPRLSIKAYTRWSDAQDIISAAFQKDEKYQALNKYDTLVTFQDHIKSLERSLNEQKQ
HEKKMKYRRERKARDAFKSLLSELRKDGKIKPGVKWSGIQPQVERDERYRNMLGHDGSTP
QELFWDVVEEEERSLRGPRNDVLDVLEDKRFELTPTSDLQEFLSIMKDDRRTANIDNDIL
QLIFERLREKRAAKRDDDKQSDRQQRRAVEDLRAHLRRLDPPIVSGDTYEKVRSRLLKSE
EFQAVSSEDLRRGAFDKHMRRLREKEEDDADRGHRRGSRVSTERETSRRERERSRGERSQ
RSTRPARRSRSPEQDPYEADRRKAIAERERNHRKSTMAENLLTSDRGGRLSPPPRRERDR
DRDRERDRERDRDRDRDRDRERDRDRDSVRDRDRDRERERDRDRDRERDRDLDRPPRSRR
DDDSHYDRERKDREDERERQYRRRIDRGSYDELPYGDERPSGSRRRRQEDEDETSRRDSR
DSKRLKRDRSRERSPTREGRARPKTPPAAPAKEVVRSGSEEGEIEE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatatggtggtccagccgcggctgcgtggcaggaacatcacactcctgatggc
cgtgcctattactataatagtgccaccaaagtgacacaatggaccaaacctgatgatctc
atgacgcctgcggagcgcgcgctttcgagtcaaccatggaaggaatacacggccgagggc
ggccgaaagtattggtacaataccgaaacgaagcaaagctcgtgggagatgcctgatgcg
tatagaaatgctatgggacagagtggtggccagccatcgtatggtcagaatggtggccac
tctcacagcagctacgaacatcctcgtgagagtcgcgaccatcgtgaccctcgtgaccaa
cgtgatcagcgtgacttttctggtcccgattcacgctatggaggctatggaaacgaatcg
agggcccaggcttttattccagcagccagcgacgaacctgagtatgcgtccccggaagag
gcagaagccgcgtttgtgaagctgctgaagcggtgtggcgtgcaacccgactggacgtgg
gaagatgctatgcgagctaccattaaggatccgcagtatcgatcaattcgagatgcaaag
ggccgacgagatgcattcgataaatattgccaagacgtgatcgttcaggacagagagcga
gcggatgaacggatggcgaagcttcgcgccgactttgagaccatgctgaaacgacacccc
gaaattgttcactacacgcgctggaagacagcccggccgatgattgagggcgagaccatc
tttcgttcgaccaataacgaagaagaacgtcgacagctgtttgaggaatacgtagttggg
ctcaaaaaggcgcacaaagagcggcagataaaggaccgcaagaatgcccttgattcgctc
aaggatctccttcctcggctcagtattaaggcatatactcggtggagcgatgctcaagat
atcatttccgcggcgtttcaaaaagacgagaaataccaggctctcaacaagtacgatact
ctggtcaccttccaggatcatatcaaatctcttgagcgctctctaaacgagcaaaagcaa
cacgaaaagaaaatgaagtatcggagagagcgtaaagcccgagacgctttcaaatcactt
ctttctgagcttcgcaaggatggtaaaatcaagccaggtgtaaaatggtccggcatccag
ccccaagttgagcgagacgagcgatacagaaacatgttgggccatgatggctccacacca
caagaactcttttgggatgttgtggaggaagaagaacgatccctgcgagggccaaggaac
gatgtcctggacgttctcgaggataaacggtttgaactcaccccaacgagcgatctccaa
gagttcctgtctattatgaaggatgatcgacgcactgctaacattgacaatgatattttg
caattgatttttgaacggcttcgcgaaaagcgtgctgccaagcgggacgatgacaaacag
tccgatcgtcaacagcgacgcgccgttgaggatctgcgagcacacttgaggcgccttgat
ccaccaatcgtgtctggtgacacatatgaaaaggtacgatctcgcctactgaaatcagaa
gaattccaggcagtcagttccgaagacctccgaagaggcgcttttgataagcacatgagg
cgacttcgagaaaaagaagaggatgacgccgatcgagggcatagacgaggcagccgcgtc
tctacggagcgtgaaacctcccgccgtgaaagggagcgatctagaggtgagagatctcaa
cgtagtacccgtcctgccaggcgcagtcgcagcccggaacaggatccgtacgaagccgat
agacgcaaagctattgcggaaagggagcgaaatcaccgcaagtcaaccatggcagaaaat
ctcttgaccagcgaccgcggcggccgactgtctccgccgccacgacgagaacgagaccgt
gaccgtgaccgcgagcgtgatagagaacgtgaccgtgaccgtgaccgtgatcgagatcgg
gagcgagatcgtgatcgcgactctgtgcgtgaccgagatagggatcgggaacgtgaacga
gaccgcgaccgtgaccgtgaacgtgatcgcgaccttgaccgaccgccccgttcacgacgc
gatgatgacagtcactacgacagggagcgaaaagatcgggaggatgaacgggagcggcag
taccgtcgccgcattgatcgaggttcgtatgatgagctcccttacggagatgagcgacca
tcaggttcacgacgccggcgacaagaagacgaagacgagacgtctcgcagagattcaaga
gactcaaagagactcaagagagaccgatcccgcgaacgatccccaacccgtgaggggcgt
gcacgtcccaagacgccgcccgcggctcctgcaaaggaggtcgtcagaagtggtagtgag
gagggagagattgaagaataa
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