Pochonia chlamydosporia: VFPPC_12730
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Entry
VFPPC_12730 CDS
T09407
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_12730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_12730
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_12730
Spliceosome [BR:
pchm03041
]
Complex A
U1 snRNP components
Sm proteins
VFPPC_12730
U2 snRNP components
VFPPC_12730
Complex B
U1 snRNP components
VFPPC_12730
U4/U6.U5 tri-snRNP components
VFPPC_12730
Complex C
U2 snRNP components
VFPPC_12730
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
VFPPC_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
28854501
NCBI-ProteinID:
XP_018148300
UniProt:
A0A179G381
LinkDB
All DBs
Position
1:1097501..1098046
Genome browser
AA seq
121 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIVHGTISSVSPQMNTALRTVKMTPRGQDPISLDTMNI
RGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKEADRGGRVGRGGRGGPRGRGRGRGRGR
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttcggttcttgatgaagtgcgcaaacgagacggtgaccattgagttgaaa
aatggcaccatcgtccacggcacaatctcttccgtctcgccgcagatgaacacggcgctg
cgcacagtcaaaatgacccccaggggccaagatcccatctccctcgacaccatgaacatt
cgaggctcaacaatccgatacttcatccttcccgactccctccccctcgacacgctatta
atcgacgacgcacccaagcccaagaacaaggcacgcaaggaggccgaccgcggtggacgt
gtaggccgcggaggcagaggcggtcccagaggacgcggccgtggtcgcggccgtggaagg
ggctag
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