Pochonia chlamydosporia: VFPPC_12760
Help
Entry
VFPPC_12760 CDS
T09407
Name
(RefSeq) U6 snRNA-associated protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03018
RNA degradation
pchm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VFPPC_12760
09123 Folding, sorting and degradation
03018 RNA degradation
VFPPC_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_12760
03041 Spliceosome [BR:
pchm03041
]
VFPPC_12760
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VFPPC_12760
mRNA degradation factors
5'-3' decay
Lsm complex
VFPPC_12760
Spliceosome [BR:
pchm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
VFPPC_12760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
28854531
NCBI-ProteinID:
XP_018148441
UniProt:
A0A179G4G6
LinkDB
All DBs
Position
1:complement(<1497696..>1498099)
Genome browser
AA seq
86 aa
AA seq
DB search
MSSAENGNISQGEGKDPSSFLSDIIGNPVIVKLNSGVVYKGELQSVDGYMNIALEKTEEY
VNGKKRRDYGDAFVRGNNVMYISADS
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagcagagaacggcaacatctcacaaggcgagggtaaggacccgtccagcttc
ctgagcgacatcatcggcaatcccgtcatcgtgaagctcaactctggcgtcgtctacaag
ggcgaactgcaatccgtagacggatacatgaacattgcgctggaaaagacggaggagtat
gtcaacggcaagaagcgcagggactatggcgatgcgtttgtgcgaggaaataatgtaatg
tacatttcggcagattcataa
DBGET
integrated database retrieval system