Pochonia chlamydosporia: VFPPC_12791
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Entry
VFPPC_12791 CDS
T09407
Name
(RefSeq) transcription initiation protein
KO
K03124
transcription initiation factor TFIIB
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_12791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_12791
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
VFPPC_12791
Prokaryotic type
Archaeal type
TFB
VFPPC_12791
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
Trm112p
PAH_ZNF598
Cyclin_N
DUF7342
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
28854562
NCBI-ProteinID:
XP_018148619
UniProt:
A0A179G3V0
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Position
1:complement(1989959..1991002)
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AA seq
347 aa
AA seq
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MFPPVGDPSGGGYQEDLNNILCCPDCKEIPPNLIEEFSSGDMVCQSCGVVVGTRIIDTRS
EWRTFANDDHGGDDPSRVGGPQDEFVEGEQLATTVAFSESKAHKALSRTQNNANQDKAQK
GLMQAYKEIVSLCEAINMGQNVSNAAKHIFKLVDKHKFMKGKPQEAVIAGCIFIACRQNN
VPRTFREIFNLTSVSKKEVGRVFKQLQKFLQKLQDTEGEGATGLNTVTNYENTSVGAEDL
CSRYVSQLGFKNQQKISKISRDLAEKANDISALAGRSPLSVAAACIYMACHLVGEPRSSL
PIAKQAGVSDGTVKTAYKHLFAAREQLIKKEWLEDGGNMDNIPQVQA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctccggtaggagacccgagtggtggggggtatcaagaagacttgaacaacatt
ctgtgttgtcccgactgcaaagagatcccacctaacctcatcgaagagttctccagcggc
gatatggtatgccaaagttgtggtgtagtcgttggcacacgcattattgacactcggtcg
gaatggcgtacttttgccaatgacgatcatggtggcgacgatcccagccgtgttggtgga
ccacaggatgagttcgtggaaggcgaacagcttgccacgactgttgcattctccgagtca
aaggcccacaaggctctctctcgcacacagaataatgccaatcaagacaaggcacaaaag
ggcttgatgcaggcgtacaaggagatcgtttcgctctgcgaagctatcaacatgggccaa
aacgtctccaatgccgccaagcacattttcaagcttgttgacaagcacaagttcatgaag
ggcaagccccaggaagccgtcattgctgggtgtatcttcattgcctgtcgacagaacaat
gtaccgcgaacatttcgtgaaatcttcaatctcacgagtgtcagcaagaaagaagttggg
agggtgtttaaacagttgcaaaagtttttgcagaagttgcaggatactgagggcgaaggc
gcaaccggtttgaacaccgtcaccaattacgagaatacctctgttggcgcagaagatctt
tgcagcagatacgtgtctcaactcggcttcaaaaaccagcagaagatttccaagatttcc
cgagatctggccgaaaaggcaaatgacatatctgcactcgccggccgatctcccctttca
gtggctgctgcctgtatctacatggcctgtcatctcgtcggcgaacctcgctcgtcgctt
cctattgcgaagcaagcgggtgtgagcgacggcaccgtaaagacggcttacaaacactta
tttgcggcacgggaacagctcattaagaaggaatggcttgaggatggtggcaatatggac
aacatccctcaggtgcaggcataa
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