KEGG   Pochonia chlamydosporia: VFPPC_12890
Entry
VFPPC_12890       CDS       T09407                                 
Name
(RefSeq) DNA binding protein SART-1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VFPPC_12890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchm03041]
    VFPPC_12890
   04121 Ubiquitin system [BR:pchm04121]
    VFPPC_12890
Spliceosome [BR:pchm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    VFPPC_12890
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    VFPPC_12890
Ubiquitin system [BR:pchm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    VFPPC_12890
SSDB
Motif
Pfam: SART-1 HIND protein_MS5
Other DBs
NCBI-GeneID: 28854661
NCBI-ProteinID: XP_018149023
UniProt: A0A179G5Y6
LinkDB
Position
1:3054453..3056393
AA seq 646 aa
MDAATIEETNRIRVSLGMKPLPVPGAASQADASSASKDEEAASTLESRQAESYENYKKHQ
EAEAAKKKREDRAAAIRKARDEAQRLAVLEGKGLGEEDDKGDMDAKAWLTGQKKRQKKID
KARKLEAELAAAEAAAAAAVQYTSKDLAGIKVAHDTSEFLGGEDQVLTLKDTTIDENEEE
GDELENLGMREQERLGERLDLKKNRGYNPNDDEEGQGGILAQYDDEIYGKKGKKFTLDAS
GTIAELADILGEPAQKAGKATVSLDDIIGDAPVSSDYLAPSEIKVKKPKKKKSKGTRQKQ
HDEDDIFPLEPPGDSNSMDLDDTETKHKKRKAESDTFVDDDDLQASLALQRKSALKKRKK
ARPEDIAKQLKEEDDDAEEEANGPSEDGGLVIGEISEFVSGLSKRDDEEEKKPRRRRTQT
RSPGLPEDYPMENSNDEDQPAIEEEPVPPQAEEEEAGVDEEKTIGSGMGAALSLLRERGL
IEGSRDTDYDAYRSREEFLSRKRLLEEELDDQTRLQRERDRASGRLDRMSVREREDWARQ
QNMWRDQQQSRRMAELFSANYKPNVELRYTDDHGRSLDQKEAFKHLSHQFHGKGSGKGKT
EKRLKKIEDEKRREAQSLFDAGRDSGMSAATAQQLKKRREAGVRLG
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggatgccgcaacgattgaagaaacgaaccgcattagggtgtcgctgggcatgaagcct
ctgcctgtccccggtgccgcctcacaagctgatgcatcctcagcgtccaaagatgaagag
gcagcaagtaccctcgagagtcgacaggctgagtcatatgaaaactacaaaaagcatcaa
gaggcagaggctgcgaagaagaagcgcgaggacagagctgcagcaattcgaaaggctcga
gatgaagcacagcgcctcgccgtcctagagggtaagggtcttggggaggaggatgacaag
ggcgatatggatgccaaggcatggcttacgggtcagaagaagagacaaaagaagattgat
aaagcgagaaaactcgaagcagagttggctgcagctgaagcggcagccgcagccgccgta
caatacacttccaaggatcttgccggtattaaagtcgcacacgacacgtcagaattcttg
ggtggcgaagatcaggttctcaccctaaaagacactacaatcgacgaaaacgaagaagag
ggcgatgagctagaaaatttgggaatgcgtgaacaagaaaggctgggcgagagactcgac
ctcaagaagaaccgaggatataacccgaatgatgacgaagaaggccaaggcggaattctg
gcccaatacgatgatgagatttacggaaagaagggcaagaagttcacactcgatgccagc
gggaccattgcagagcttgctgatatccttggcgagcccgctcaaaaagccggcaaagcc
actgtcagtctcgacgacatcattggtgatgcgcctgtgtcttccgactaccttgctccg
tcagaaatcaaggtgaagaagcccaaaaagaaaaagtccaagggcacgagacaaaagcag
cacgatgaagacgatatattccctctggaacccccaggagacagcaacagcatggatttg
gacgacacagagactaaacacaagaaacgaaaagcagagtccgatacatttgtagacgac
gacgatctccaagcgtcattagcacttcaaaggaagagtgcacttaagaaaagaaagaag
gctagacccgaggacattgcaaaacaactcaaagaggaagacgacgacgcagaagaagaa
gcaaatggcccgagcgaagatggcgggttagtaattggagaaatatcagaatttgtgtcc
ggcctgagcaagcgagacgacgaggaagagaagaagccaagacgtcgtagaacgcaaacc
cgcagtccaggtcttcccgaagactaccccatggagaacagcaacgacgaagaccaacct
gccatcgaggaagaacccgtaccgccccaagcagaagaagaagaagccggcgtcgatgaa
gaaaagaccatcggctccggcatgggcgctgcactctccctcctccgtgaacgtggtctc
atcgaagggtcccgcgatacagactacgacgcctatcgctcccgcgaagaattcctctcc
cgcaaacgcctcctcgaagaagaactcgacgaccagacccgtctacagcgtgaacgagac
cgcgcatcaggccgcctagaccgcatgtccgtccgcgagcgtgaagactgggcccgccag
caaaacatgtggcgagatcaacagcaatcccgacgcatggcggagctcttctctgcaaac
tacaagcccaatgttgagctgcggtacaccgacgaccatggtcgttcgctcgaccaaaag
gaagcattcaagcacctaagtcaccagttccacgggaagggcagcgggaagggcaagaca
gagaagcgccttaaaaagattgaagatgagaagcggagagaggcacagagtctctttgac
gccggcagggatagcggtatgagcgccgctacggcgcagcagttgaagaagagacgggaa
gccggtgtacgacttggatga

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