Pochonia chlamydosporia: VFPPC_12972
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Entry
VFPPC_12972 CDS
T09407
Name
(RefSeq) vesicle transport v-SNARE protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04130
SNARE interactions in vesicular transport
pchm04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
VFPPC_12972
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
VFPPC_12972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_12972
Membrane trafficking [BR:
pchm04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
VFPPC_12972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
TBCA
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
28854743
NCBI-ProteinID:
XP_018149371
UniProt:
A0A179G6W8
LinkDB
All DBs
Position
1:4059820..4060638
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AA seq
227 aa
AA seq
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MSNPLDTEAGSELFSSYEAELKLVQADLLQKLDQIPELSGEPRKSAVSQAGRALEEADEL
LGSMRLEKQNIPTSSRAKVNQRFRNYESDVDSQRRKLAAFTSDRADPYASRYTDEPQGST
DALLEQRQQLLSGTERLDRSTQRLKASQQLAYETEAIGASTLADLGVQRERIQSAHDTLL
NSEGYVDRSVKTLRGMARRMATNKVITIAIITVLVLLIIAVIVSKFR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccccctcgacactgaggctggctctgagcttttcagctcttatgaagcagag
ctgaagcttgtgcaagcagacctgttgcagaaactggaccagatcccagagctgtcagga
gagcctcgtaaaagcgcagtcagtcaggcagggcgggctttggaggaagcagatgaactg
ctgggctctatgcgcttggaaaagcaaaatatcccaacttcttctcgcgccaaggttaac
cagcgattccgcaactacgaatcagacgtcgactcccagcgccggaaacttgccgccttc
acttctgatcgcgcagatccttacgcatcacggtatacggatgagccccagggatcaacc
gatgcccttcttgagcagcgacagcagctgctgtccggcacggaacgtctcgatagaagt
acccagaggctaaaagccagccagcaattagcgtacgagactgaggctattggagcaagc
actctggccgaccttggagttcagcgtgaaagaattcagagtgcgcatgatacactgctc
aacagcgagggctacgtcgacaggagcgtaaagacgctgcgggggatggctcgtaggatg
gctacgaataaggtgatcactattgccatcatcactgttctggtacttttgattatcgcc
gtcattgtcagcaagttcagatga
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