KEGG   Pochonia chlamydosporia: VFPPC_12978
Entry
VFPPC_12978       CDS       T09407                                 
Name
(RefSeq) nuclear envelope protein
  KO
K14315  nucleoporin NDC1
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VFPPC_12978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_12978
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VFPPC_12978
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 28854749
NCBI-ProteinID: XP_018149395
UniProt: A0A179G642
LinkDB
Position
1:4112463..4114576
AA seq 662 aa
MAGAPVRRAPYKDTLQPALHRRFSSTAILLLAVSYLEALLLANWGSYFWSWFPIGPAGFR
TLLIFSCGLSILILRIAHYHVGLKTTESGLQTLNSSLLSLSTYETGFWYSVSSFLFCPIF
LFSMSESSNLQWIIYFGGSRARLNERPLFLACYLGVCALLQTVAHYKIDVDRLDFGISKR
QTKTQHKALSVLPRSFQIVLLQLPGTLAGCAQQAISALLLCLILYYFILRGFAWGWALTF
LRPFYSLPKTSIVPSTWPTDIYLLFRCAYAGTLMNFIWATGNTAFSVFMVREPLKNGNPL
TSESKDPNGSLLNGLKSKKLSIKSFAMWELAIIAQDFEARRLAIFCDIDRKDGPMWSQVY
AICMELLKQMETRIDEYGKPPPSAVPQPNPPAEVKQRTSAPLRQDAIFTKKGETSGLLGG
VEKAWDQIARAPGSSPVSELSPLAKKTWKDAKDRVLTKEQQEALSPEHLRSEFGNWTTNL
MKIEYIGGLFRHDFRTRVAGVVMGTPYAEPTLYTNAVQALCLLAVHSLAEDQFGNVHRDV
PSIIRTLTAVIRKVENLKQQFPLHWTDPSGNRESPEVDQILDTLRTGLEQVVSKFEPYSS
DLRLSLGDLRLAKESFARPEKEVPAPKEKEPVVQSKPIEGKKAESSRAHRREYKRVEMEQ
VR
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcgggcgctccagtgcgaagagctccttataaggacactttgcagcctgctttgcat
aggcgcttttcttcgacagctattcttttgttggctgtgtcgtatctggaagctctcctc
ctggccaactggggctcatatttctggtcctggttcccaattggacctgccggtttccga
acactcctcatattctcatgcggcctctccatcctcatcctgcgaatcgcacattaccat
gtcggcctgaaaacgacggaatcggggctgcaaactctcaactcgtcactacttagcctg
tccacatacgaaactggcttctggtacagcgtctcgagcttcttgttctgccccatcttc
ctcttttccatgtcggaatcctcgaacttgcagtggataatctattttggcggcagccga
gcacgattgaacgagcgaccgttgtttcttgcttgctatctgggagtctgtgccctgttg
caaactgtcgctcactacaaaatcgacgttgacagattggatttcggcatttccaagcgg
cagactaaaacccagcacaaggcgctcagcgttttgccacgctcctttcagattgtcctc
cttcagcttcctgggaccctggcaggctgtgcacaacaagccatctcagctttgctgctg
tgtctgattctatactacttcatcctgcggggcttcgcatggggttgggctttgacgttc
cttcgacctttttacagtctacccaagaccagcatagtcccatcgacatggccgactgat
atatatctactgttccggtgcgcttatgccggcacattgatgaactttatatgggctacc
ggaaacacagccttctccgtcttcatggtcagagagcccttgaagaacggcaacccttta
acgtcggagtcgaaggatccaaatggctctctgctgaatggactaaagagcaagaagctc
tccatcaagtctttcgcaatgtgggagcttgccatcatcgctcaagatttcgaggctaga
cgactggcgatcttttgtgatattgaccgcaaagacggcccgatgtggtcgcaagtctat
gctatctgcatggaactcctaaaacaaatggagacccgtattgatgagtacggaaagccg
ccgccctccgccgtcccgcaaccaaatcctcctgccgaggtaaagcaacgtacgtcagct
ccgcttcggcaagatgccattttcacgaagaaaggcgagacatctgggctgctcggcggc
gtggagaaggcctgggatcagatcgctcgagctcctggttcatcgcctgtatcggagctc
agtccgttggcgaaaaagacatggaaggatgccaaggacagagtgctcaccaaggagcag
caggaggcattatctcctgagcatctacggagtgagtttggcaactggacgacgaatctc
atgaaaatcgagtacattggaggtttgttccgacacgattttcgtactcgagttgccggc
gttgtcatggggactccctacgctgagcctactctctacaccaatgctgtacaagctctt
tgccttctggcggttcacagtcttgccgaggatcagtttggaaacgttcatagggatgtt
cccagcatcatacgaactctaactgcggtgatccgaaaggttgagaacctcaagcaacag
tttcctttgcactggacagacccaagtggcaatagagagtcaccagaagtggaccagatc
cttgatacattaaggactggcttggagcaggtcgtttcaaaatttgagccctacagcagt
gacttaaggctctctcttggggatcttcgcttggcaaaggaatccttcgcgcggcctgag
aaggaggttcctgccccgaaagaaaaggagcccgttgtacaatcaaaacccatagaggga
aagaaggcagagtcgtcaagagcgcaccggcgggagtataaaagggtggaaatggaacaa
gtacggtaa

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