Pochonia chlamydosporia: VFPPC_12980
Help
Entry
VFPPC_12980 CDS
T09407
Name
(RefSeq) chromosome segregation protein (SepB)
KO
K11274
chromosome transmission fidelity protein 4
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_12980
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
VFPPC_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Ctf4_C
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
B-prop_COPA_B_2nd
Beta-prop_Vps41
Beta-prop_RSE1_1st
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_EML
eIF2A
DUF6476
WD40_MABP1-WDR62_2nd
EIF3I
DNA_pol_alpha_N
WDR90_beta-prop_4th
WD40_RFWD3
WD40_RLD
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
28854751
NCBI-ProteinID:
XP_018149399
UniProt:
A0A179G673
LinkDB
All DBs
Position
1:complement(<4127134..>4129751)
Genome browser
AA seq
819 aa
AA seq
DB search
MDSTASRPRPRPAHTQGTTRCAYTTDGNRLVTVGSNNTIRLYKTGSDGEPTNIDDCQEQN
VSIAAGKDFFVVGSEDGTWCAVASDELSVKLVNTKDITQVKHMREHSKPARHVTLDPQGR
LAALSCTDGIIYIYSLTSEEPELIRKVDGIIGAVDSEAEVSTRVAWHPDGRAFAVPTPTK
DIQVISKNDWEKQRRFADGHLSDITAIAWSPNGALLASAGKDGKVLIWETKTQSVIQRYD
YSNVIDLAWHPSRNILSFATTDGEVFIYPDFLPDQFSPLLKLNTQPAPFIHDPLSEISGN
RQQFPINGHKEQAIPTRPRRDSLASIDSLLGDEAEDDDFVVDDDGAGYAVGRGSKRVRDV
DDAFGDPASKRMHLMQPQHHEAFQPGSTPWRGNRKYLCLNLIGFVWTVDQDSHYTVTVEF
YDHEFQRDFHFTDTFLYDKACLNERGTLFSSPPKDDAPAYIFYRPHESWTQRSDWRTQLP
KGEAVTAMSLSESFITVTTSANYVRVYTLFGMPFRVYRPKSSPMVTCASWRDYVLTIGNG
PVGSDGRTRLLYTIENIKRDEICQNEDTVALPEGAILKSVFFSDNGDPCIYDSTGTLLTL
LHWRQPSRACWVPLLDTNLLSRLASGRKNESYFPIAVADNRFHCIILKGGDQYPYFPRPL
LSEFDFSIPLASPPDKKKKKKSDDAEGGEDEEMTEDKEEEDEDAENRKLEQQFMLKGVQA
AQLRDLVDATSGNHTQRSLLSRIELEIDKTLLQLLAVECRQGEDRGMRALEMVELMRDRT
GRMMEAAGKVAERYGRTVLGEKIREVGEKRAGGMDEEDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacagcatccagaccacggccacggccagcccacacccaaggaacaacgagg
tgtgcatatacgacagatggcaatcgacttgtgaccgtcggctccaataatacaattcga
ctctacaaaactggttctgacggagaacctacaaatatcgacgactgccaagaacaaaat
gtctccatcgcagctggaaaggacttctttgttgtcggctccgaagacggcacttggtgt
gcggttgcaagtgatgagcttagtgtcaagcttgtcaataccaaggacattacacaggtg
aagcatatgcgggagcacagcaagccagccagacatgtcaccttggaccctcagggacgg
ctagctgcactgtcttgcactgacggcatcatatacatatactccctgacttctgaggag
cctgaactgatccgtaaagtcgatggaatcattggagccgtggacagcgaggccgaggta
tcgacaagagttgcctggcaccccgacggccgagcctttgcagtacccactccgaccaaa
gatattcaggtcatctccaagaacgactgggagaagcaaagacgttttgccgacggccat
ctgtctgatataactgccattgcctggtctccgaacggtgccctcctagcctcggccggc
aaggatggcaaggtcttgatctgggaaaccaaaacccagagtgtcatacagcgatacgat
tactccaacgtcatcgacctggcttggcacccgtccaggaatatattatcattcgcaact
accgatggcgaggttttcatctacccagacttccttcctgaccaattttctccgttattg
aagctcaacacccaaccagctccctttattcacgatcctttatccgaaatctcaggaaac
cgacagcaatttccgatcaatggccacaaagaacaagcaattcccacccgacctcgtagg
gactctttggcgagtatagactccctgcttggtgatgaggcggaggatgatgattttgta
gtcgacgacgacggtgctggctatgccgttggccgaggtagtaagcgagtacgcgatgtc
gatgatgcgttcggggatccagcgagcaagcggatgcatctcatgcagccacagcatcat
gaggcattccaacctggttcaacgccttggcgaggcaacaggaaatacctgtgtctgaat
ctcattggatttgtgtggacagtggaccaagactcgcactacacagtgacggtagagttc
tacgaccacgaattccaacgagattttcacttcacagacacgtttctctatgacaaggct
tgcctgaatgaacgcggcacgctgttttcgagcccgcccaaagatgatgccccagcctac
attttctacagaccacacgagagttggactcagcgttcagattggcgaacacagcttcca
aagggagaggctgtcacagccatgtccctgagcgagtccttcatcacagtaaccacatct
gccaactacgtccgagtatacactctcttcggcatgcccttccgggtgtatcgccccaag
agttctccgatggtaacttgcgctagttggagagactatgtcctcacaataggcaatggt
cctgttgggtcagacgggaggacgcgtctactctacacaattgagaatatcaaacgagat
gagatatgccaaaatgaggacacagtagccttaccagaaggggcaattctcaagagcgtg
ttcttctcagataacggggatccgtgcatttacgactcaactggcactctactcacacta
ctccactggcggcaaccatctcgggcttgctgggtaccattattggataccaaccttctc
tcacgtctagcatctgggcgaaagaatgaatcatacttcccaattgcagtagcagacaac
aggttccactgtatcattctcaagggcggcgaccaatacccctatttcccgcgaccactc
ttatcggaatttgacttctccataccattagcatcaccacctgataagaagaagaagaag
aagagtgacgacgctgagggtggcgaagacgaggagatgacagaagacaaggaagaagag
gatgaagacgccgagaatcgaaaactcgagcagcaattcatgctcaaaggtgtacaggcc
gctcaactacgagatctggttgacgcaacctctggtaatcacactcagagatctctgctt
tcccgtattgagctggaaatcgacaagactctcctgcagttactggcagttgagtgtcgt
cagggcgaagatcgcggtatgcgtgcactcgaaatggtggagctcatgcgcgacaggaca
ggtcgcatgatggaggcagctggcaaggttgccgagaggtacggtcgtacggtcttgggc
gagaaaattcgggaagttggggagaagagagccggtggtatggacgaggaggatttctaa
DBGET
integrated database retrieval system
