Pochonia chlamydosporia: VFPPC_13089
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Entry
VFPPC_13089 CDS
T09407
Name
(RefSeq) ATP-depentend DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03420
Nucleotide excision repair
pchm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_13089
03430 Mismatch repair
VFPPC_13089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_13089
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VFPPC_13089
DNA repair and recombination proteins [BR:
pchm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VFPPC_13089
MMR (mismatch excision repair)
Other MMR factors
VFPPC_13089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
28854860
NCBI-ProteinID:
XP_018149922
UniProt:
A0A179G9L1
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All DBs
Position
1:complement(5582409..5585381)
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AA seq
990 aa
AA seq
DB search
MATPDPETILRSLNKAQRRAVTSNSSTVAILAGPGSGKTHTLTSRLVWLIQRAGYQPADV
IVATFTVKAAREMKNRLGKRLGEEVEKKIVLGTFHSIARRYLAVYGKRIGLDPKFGIADD
GDSRAIIQRIIKRHKLQIEPQHAKGWISKKKSKGTTPIPRQNGKQPQDNAALNECYKEYQ
EHLARSNLLDYDDLLVRCVELLEDHPSCVSNVQAVLIDEYQDTNGIQYDLMRLFAQARQR
ITIVGDPDQSIYGWRSAEIKNLYRLLRDYPETDEISLEENYRSSQLILDMSLQVIQQDTK
RYQKVLLPVHTKGTKPVLRKLRSSSGEGEWIVSELRRVITMFGGALKNEDVAILLRSASL
SRHIESALGKAGIPYRMIGGHKFYERKEIKILLDYLRVVYQPDNNDAVARIINVPRRGIG
EATIKALLEEAEKSRLSLWALLWRHCRGGRQATTKIRPNMEQKLNTELLKIISTLRQNMR
EINNSGNMTLMDLIVQLTDQLQFQKYLEAEYQDDYEQRWANVQELLSLANDFVRDYGESE
DEALPDIEDVEQVKDDDVLGKFLANVALASDAQSDDKEQDKTSQVTISTIHAAKGLEWPV
VFVPSVYEGSIPHSRSEDMDEERRLLYVAMTRAKALLYLSCPIYGSQGLSNKVELSPFVS
SFSESFAQKGPSFNRPIVESVGRILDRVIPTEKSIFDKIPPMFCPEDDQFPIDPFDPKDP
DGLEPHGDGQYGRASKRQKIQPLPDRGAAMQEMRWKPDYATTMEQSSGFTMSSLPGFVSA
GAHRAALTASGIDAEAARNTASKRNTKGTTNRQPNQQSLLGFVTTDSKAISAPSATKSAP
KDYSLARYQAAASRVARQSLPQPVVINNSPQEATIAPEFAKHKILGAKSISRQSTVKKSA
GEAPGKQYACFSSSPPRQVSPEPQKEEPRPTATTFQRLATSFHSTTFTSMKPVGGIRRPV
GLGPPPSMDRLRKPFKPLTINRPRGPPGGS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccagatccagaaacaatcttgagatccttaaataaggctcagcgccgtgca
gttacatccaattcatccacagtggctatattggcaggaccaggtagcggtaaaactcac
acactgacctcccgccttgtatggctgatccaacgggcgggttatcagcccgccgacgtc
attgtcgcgaccttcaccgtcaaagcagctcgggaaatgaagaatcgactcggcaaaagg
ctaggtgaagaagtcgagaaaaagattgtgctagggacttttcattctattgctcgacga
tacctggcagtttacggcaagcgaattggcctggacccaaaatttggaatcgcagacgac
ggcgactcccgagctattattcagagaataatcaaacgtcataagcttcaaattgaacct
caacatgcaaaaggttggataagcaagaagaaatccaaggggacgacaccaataccaaga
cagaatggcaagcagccacaggacaatgcagcgctcaatgagtgctacaaggagtaccag
gagcatctcgccaggtccaatcttcttgactatgatgacctcctggttcgatgtgtcgaa
cttttggaagatcatccctcgtgcgtctccaatgttcaggctgttctcattgatgagtat
caagacacaaatggcatccaatatgacctcatgaggctttttgcacaggcacggcagcgg
ataactatcgtgggagatcctgatcagagcatatacgggtggcgttcggcagaaatcaag
aatttgtatcgtctcttacgcgactacccagaaaccgatgagatatcgttggaagagaat
tatcggtcatcacagctcatcctcgatatgtcgctacaagtcatacagcaagatacgaag
agataccagaaagtgcttctaccagtacatactaagggtactaagccggtgctccggaag
ctaaggagctcatctggggagggggaatggattgtttctgaattgaggagagtcatcaca
atgtttggaggggcgctaaagaacgaagacgtggcgatactgctacgctcagcgtcactc
tccaggcatattgagtctgctcttggtaaagcaggcattccctatcgtatgataggcgga
cacaaattctatgaacggaaggagattaaaatcttacttgactacctacgggtggtctac
cagcctgacaacaacgacgctgtcgctaggatcatcaacgtacccagaaggggtattgga
gaagcgactatcaaggccctactagaggaggcggagaagtcgaggctcagcctatgggcg
ctcttatggagacattgccgtggtggtcgacaggccacaactaagattcgtccaaatatg
gagcaaaagttgaacactgagcttttgaaaatcatctctactttaagacagaatatgcga
gaaataaacaactccggcaacatgacgctaatggacctgattgtgcagttgacggaccag
ctgcagttccaaaagtatttggaggcagagtatcaagacgattatgaacagcgttgggcc
aacgtccaagaacttctgagtctggcaaatgattttgtacgagactatggagagtccgaa
gacgaagccctccccgatattgaagacgtcgaacaagtcaaggacgatgacgtcctggga
aaattcctcgccaatgtcgctctcgcatccgacgcacagtccgacgacaaggaacaagac
aaaacctctcaagtcacaatttcgaccatacatgctgccaaagggttagaatggccggtg
gtgttcgtaccgtccgtctatgaaggttcgatacctcattctcgatctgaggacatggac
gaggagcgacgacttctttatgtggcaatgacccgagcaaaagcattgttgtatttgagc
tgtcctatttatgggtctcaagggctcagtaataaggttgaactctcaccgtttgtctcg
agcttttctgaatcctttgcccagaaagggccatcgtttaatagaccgatcgttgaaagc
gtcggtaggattctcgacagagtgataccaactgaaaagtcgatattcgacaagatacca
cccatgttctgtcccgaagacgatcaatttcctattgatcctttcgatccaaaggaccct
gatggtcttgaaccacacggcgacggtcagtacggcagagcatcaaaaaggcaaaagata
cagcccttgccagacaggggcgccgctatgcaggagatgcgatggaaaccagattatgct
acgacaatggaacagtcatcaggtttcaccatgtcctcgctgcccgggttcgttagtgcc
ggagcacatcgagcggcgttgactgcatctggtattgatgcagaggcagcacggaatacc
gcttcaaaacggaataccaagggaacgacgaaccgtcaacctaatcagcaaagcttactt
ggcttcgtcaccacagattccaaagcgatttcagcaccttctgccacaaaatccgcaccg
aaagattattcgctggcccgatatcaagcagccgcatcacgagtcgcgcgtcaatcactg
cctcaacctgttgttatcaataacagtccacaggaagctacaatagcccctgaattcgca
aaacacaaaatcctgggtgccaaatctatttcacggcagagtaccgtgaagaaatcggca
ggggaagcacctggaaaacagtacgcttgcttttcgagctcaccccctcggcaggtatcc
ccagagccgcaaaaggaggaaccgcgtcctacagcaaccactttccaacgcctagcaaca
agtttccactcaacgacattcacatccatgaaaccggtagggggaataaggcggcccgtt
ggcctcggtccaccaccatcaatggatcgtctccggaagccattcaagcctcttacgatt
aatcgtccacggggcccaccaggtggttcataa
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