Pochonia chlamydosporia: VFPPC_13114
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Entry
VFPPC_13114 CDS
T09407
Name
(RefSeq) RSC complex subunit Rsc9
KO
K11763
chromatin structure-remodeling complex subunit RSC9
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_13114
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_13114
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
VFPPC_13114
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VFPPC_13114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
28854885
NCBI-ProteinID:
XP_018150061
UniProt:
A0A179G8Y1
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All DBs
Position
1:complement(6025706..6028661)
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AA seq
940 aa
AA seq
DB search
MTTTPQEVPLHSIDRTPEYEEFMTKLKEFHEKRGTVLDPEPKVGLIYLDLFKVFNHIVAS
GGYDKVSEEKLAWRRMAAELGLHSNNEASTAFSLKEKFYKNLAAYEIKTVHNKEPPPKEI
LEDITAKGASLLTRTLENFRPKRDSNVNAGDSAASGDDGTPTRERSAPEAPSSSRASRGL
REAPPQRVIFQPDTGPSRSTRQAVQQNAAQSASPAQSTTQTAAHHPNMPPMPPGGHQGRG
PSIMHHPANTENTSQMVLSYQPKHLKPFQLRAVATPSSAPNEFQRHRLPHRPAPVDPANR
QPMQPGTGFDGPNIYTRCLNALRSGVPSEQAFALNHLVKISFERGDKYRFDAFPGLAEGL
VEKGLQVGGLFYHVSWTVSWDSYADSGSIGSLDGNNGTPDILDRIANLVEKDLPDALQTE
AFTDQMVLITEAVLTLRNMVTLPENALNMSDFYPIKDLICIIMHLPAKDSLTELKHMALD
IAEQITPYMVLESDDPLYRTLLAQLASDDRGTILTSLRALGRISMNLEATNKLGNVPAEL
LQRISNWLLLNDDELMDACLDLLYQYTAVVTNVDNLVRSTSPEILVDHLVLLLAHGAKKV
HRDFILVPEQKLPSRDEIPPMPEDLLQQMIKLEEPDRVHKWVKCFFEEDNDSFVTQLAAW
QAYQSAFVSPLKAIGQPMITPADFIRNSTSVYKDSNAQVLREPGEPQQKFIIHGIRARPR
PLNFDGAEYARCLWATNLEKRNEKCGQFFLKAEQLWSHIITKHLGEQRNEAGQFDNAEKQ
FVCTWGGCSKYAKPTKLHLHDFARHINTHVMNALPGDPKTSQKSWVIPAKTMAVTYEETA
TVRDERNPNLPPQAAGIPLSAVLVLRNIARNVVKTEAEEQLLKEQESSNSEKGGWNEKLF
RAVLPRLFEVLAENRALSPYISSLLDLIRPKKQPEEEDDY
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgactactacgccgcaagaggtgccactgcactccatcgaccgcactcccgagtacgag
gagtttatgaccaagctcaaagaatttcatgagaaacgtggtactgttctcgacccagag
cccaaagttggcttgatatatctcgatcttttcaaagttttcaatcacatcgttgccagt
ggaggttacgacaaagtttccgaagagaagttggcctggcggcgcatggcagctgaactg
ggcttgcattcgaacaacgaggcatcgacagcgttctccctcaaggaaaagttttataag
aacttggctgcgtacgaaatcaagacagtgcacaataaagagccaccgccgaaggagatt
ctagaggatatcactgcgaagggtgccagtttgctgacccgcacactcgaaaacttccga
ccgaaacgcgacagcaacgtaaacgctggcgactctgcggcatcaggcgacgacggcacc
ccgactcgcgaacgctctgccccggaagctccttcgagctcgcgtgcttctcgtggcctt
cgagaggcacctccgcaacgcgtaatcttccagcctgacacaggaccaagtcgttcgact
cgacaagccgtccaacagaacgctgcccaaagcgcatccccagctcaatcaactacacag
acagcggcacatcatccaaatatgcctccaatgccgcccggtggccatcagggtcgtggg
ccctctatcatgcatcatcctgcaaacacagaaaacacatctcaaatggttctttcatat
caaccgaagcacctcaagcctttccagctaagagctgttgcaacccccagcagtgcccca
aatgagttccaacggcatcgtttgcctcatcgcccggctcccgttgaccccgctaaccgc
caaccgatgcaaccaggcactggatttgatggacctaatatctacacgcgttgcttgaat
gcgttgcgatccggtgtcccgagtgagcaagcctttgccctgaaccatcttgtcaagata
tcttttgagcgtggcgacaaatatcgcttcgatgctttccctggccttgccgaaggactt
gtcgaaaagggtctacaagttggcggcctgttttaccatgtttcgtggaccgtttcatgg
gactcatatgcggactctggtagcattggttcactggatggaaacaatggcacgccagat
atcctcgatcgtattgccaacttggtagaaaaggacctgccagatgcccttcaaaccgag
gcattcacagaccagatggtgttgatcacagaagccgttctaactctgcgaaacatggtg
actttaccggagaatgccttgaacatgtctgacttctatcccatcaaagacctgatttgc
atcatcatgcacttgcctgctaaggactctctaaccgagttgaagcacatggctttggac
attgcggagcaaattacgccatacatggttttggagtctgacgatccattatacaggact
ttgctggcgcaattagcatctgatgatcgaggtactattttgacgtctctacgggcatta
ggtcgcatctcaatgaacctggaggctacgaataagcttggcaacgtacccgcagaactc
ctgcaacgtatttcgaactggttgctcctcaacgatgatgagctaatggatgcttgtttg
gatttgctttaccaatacacggctgttgtcaccaatgtagacaatcttgtccggtcaact
tcaccagagattctggtggaccatcttgtgttgctgttggcacatggggccaaaaaggtt
caccgagacttcattctggtgcctgagcagaagctcccgtcccgagatgaaatccctcca
atgccggaagatttacttcaacaaatgatcaagctggaagaacccgaccgagtccacaaa
tgggttaagtgcttctttgaggaggacaatgattctttcgtcacacagctagccgcttgg
caagcttatcaatctgcctttgtcagtcccttgaaggctataggacaacccatgattacg
ccggccgacttcattcgcaacagcacctctgtctacaaggattccaacgcccaggtgctt
cgcgaacctggagagccacaacagaagttcattattcacggcatccgcgctcgaccacgc
ccgttaaacttcgatggtgcagaatatgcccgctgcctgtgggcaaccaatctagaaaag
cgaaatgaaaagtgtggacaattcttcctcaaggcagagcaactatggagccatatcatc
acaaaacaccttggtgagcaaagaaacgaggccggacagtttgataacgcggagaagcaa
ttcgtatgcacttggggtggttgctccaagtatgccaaaccgacgaaactgcatttgcat
gactttgcgcgccacatcaacactcacgtcatgaatgcccttccaggcgacccaaaaaca
tcgcagaagtcctgggttatcccagccaaaaccatggcggttacatatgaagagactgca
acggtccgggacgagagaaaccctaacttgccccctcaggcagcgggtattcccctgagt
gccgttctggttctgcgcaacattgcacgtaatgtagtcaagacggaagcagaggagcag
ctactcaaggagcaagagtcaagcaactccgagaaaggtggttggaacgagaaactgttt
cgagcagttttgcctcgtttattcgaggttcttgctgagaatcgagcattgagcccgtac
atctcatctctactagatttaattcggcccaagaagcaacctgaagaggaagacgattac
tag
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