Pochonia chlamydosporia: VFPPC_13131
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Entry
VFPPC_13131 CDS
T09407
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VFPPC_13131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_13131
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
VFPPC_13131
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
MAML2_TAD
DUF2076
TFIIA
Motif
Other DBs
NCBI-GeneID:
28854902
NCBI-ProteinID:
XP_018150162
UniProt:
A0A179GA99
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All DBs
Position
1:complement(6314315..6315654)
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AA seq
370 aa
AA seq
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MMSSAHVYTHHQYNPQGDSSWMHQQASHHQQSHVSVAQQQQQQQQQAQQQQAQQQQPHFN
RMPGNHSAGGAGGNLGGAHAQDAGHENISEDNRRTMAYIADLLNENTREAALLELSKKRE
QVPELALILWHSFGVMTSLLQEIISVYTLLNPSQLTAAASNRVCNALALLQCVASHNDTR
TLFLNAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFLLTTEIIPLC
LRIMETGSELSKTVAIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVAQLVESQTAR
LLKHVVRCFLRLSDNARAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDNV
VDNSQGVSSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcggcgcacgtttatacacaccaccagtacaatccccagggcgactccagc
tggatgcaccagcaggcgtcgcaccaccaacagagccatgtatccgttgctcaacagcag
cagcaacagcagcaacaggctcagcaacagcaagcccagcaacagcaaccgcatttcaac
cgtatgcctggtaatcactctgctggtggagctggcggcaacctgggaggtgctcatgcg
caggatgctggccatgagaatatctcggaggataatcggcgcaccatggcgtacattgcc
gatttgctaaacgagaacacaagggaagctgcgctgttggagttgagcaaaaagagggag
caagtgcctgaattggctctcatattgtggcactcatttggtgtcatgacgtcgctgctg
caggaaatcatttctgtttatacgctgctcaacccttcccagctcacggccgccgcgtca
aaccgggtttgcaacgccttggcactgttgcagtgcgttgcgtcgcacaacgacacccgc
acgttgtttctcaatgcgcatatcccgctgtttttgtacccctttctcaatacgacgtcc
aagtcgcgcccgtttgagtatttgcgactgaccagcctcggtgttattggcgccttggtc
aagaatgactcctcggatgtcattaactttctcctcactacggagatcatccctctatgc
cttcggattatggagactggctccgagcttagcaagactgtggccatatttatcgttcag
aagattctgctggacgacaacggtctcaattatatctgcgctacctatgagcgcttctat
gctgtaggcaccgtgcttagcaacatggttgctcagctagtcgagtctcagactgcccgg
ctcctcaagcacgtcgtacgatgcttcctcagactcagtgataatgcccgtgcccgtgag
gctcttcgccagtgcctgcccgagccgcttcgtgacgccacgttctcgtccgttttgaga
gatgacgcagcaaccaagagatgccttgcccagcttctcattaatctgtctgacaatgtg
gtagacaactcgcaaggagtctccagcctgtga
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