Pochonia chlamydosporia: VFPPC_13472
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Entry
VFPPC_13472 CDS
T09407
Name
(RefSeq) vacuolar morphogenesis protein AvaB
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04138
Autophagy - yeast
pchm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
VFPPC_13472
04148 Efferocytosis
VFPPC_13472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_13472
Membrane trafficking [BR:
pchm04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
VFPPC_13472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
WD40_CDC20-Fz
DUF7326
CTLH
Motif
Other DBs
NCBI-GeneID:
28855242
NCBI-ProteinID:
XP_018147651
UniProt:
A0A179FZN0
LinkDB
All DBs
Position
2:complement(4607803..4611206)
Genome browser
AA seq
1070 aa
AA seq
DB search
MLSAFTARPIIELRQRDKSKIETILAYGDRILVGLNSGALRVYRLNDLSSQQQGESTPAV
DPGAPDTNSPQNGDNLAPRPSGKPTDLLREVEKFSTRAIDQLAIIKEANIIVSLSNYYIS
LYDLQNYDHIETLSRTKNASCFAVTSNIVKDQDTGIPEIISRLAVAVKRRLLLWNWHESE
LSEEVAEVVLAESIRSITWANATKVVCGMNSGYVVVDVLTREVVEVVSPGAVGANGQGSR
FGAVSTAGMGYVGLGGYTPKPLAAKLADGQMLLAKDINTMFIDDSGKPLEKRQIPWPLAP
ESIGYSYPYILALQPPAKGSLEVRNPDTLSLMQTISLPGAAQLHFPPPTVSLAHAGKGFH
ISSDRCVWKMGATDYDSQVEELIQNANFDEAISILNMLEDALLKNKVETLREVKMLKAEM
LFKKKKFRQAMDLMNEDDVHAPPERVLRLYPPKISGSLSQWAETRHEDATSGHGAMTTNG
ERPSSRDAATTTVSTANVGGFAKLFLGGHKKTASDTASVLSKKDGVDVEDTQTAKDAESA
EDKPLDSKDLKNAVLELNSYLAGTRARLQRYIDPVTGKLKDQEDKQRPIEEAAERFLRTT
QTESEQKLEEQLRNTFRLVDTTLFRAYMFSQPSLAGSLFRIPNFCDPDVVNEALLEHNRY
TELIDFFYGKRLHVKALSLLHRFGSPVKPDEAAPSLHGPDRTIEYLKNLPPSEIDLIIEH
AGWALKSNPTYAMEIFTGDTENAETLPRDRVVSFLHSVDPQLERQYLEHIINELDDMTHD
FHNRLVELYVDTLRHMNKNWAWDEIMSNFVTFLRDSRQVYSLTKALGMIPKDDPSFYEAQ
AVILSNMGQHRKALEIYVFQMRDYAKAEEYCNRVHKSQDMAVGPSMNSMENASIDTDDGT
QSIYHILLSLYLKPPPLHEVQLKPALDLLSKHGSRLPATSTLSLIPDDLPVNSLEAYFRG
RMRSANSLVNESRIVAGLRKAEQIAIAARLNIGDSEINGQGGRNRHVTITDERHCFVCHK
KLGGGMRIGGSVVAVLPDNTVVHYGCLNRALGQKADNSRPTNRGRDMPFA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgcctttacagcccgcccgatcattgagctccggcagcgtgacaagtcaaag
atcgagactattttggcttacggcgatcgcattctcgtcggtctcaacagtggcgcctta
cgcgtctacagattgaatgatctctcctcgcaacagcaaggcgaatcaacacccgcagtc
gaccccggagctcctgataccaactcaccgcaaaatggagacaacctggccccacgaccg
tcgggcaaaccgacagatttgctgcgcgaggtagagaagttctcgactcgagccattgac
cagttggcgatcatcaaggaggccaacataatagtctctctgtcgaattactacatatca
ttgtacgatttgcagaactacgatcatatagaaactctaagccgaacgaagaatgcatct
tgttttgccgtgacatccaatattgtcaaagaccaggacaccggaatacccgagattatt
agccggttggcagtggcagtgaaacgaaggcttctattgtggaattggcatgagagcgag
cttagcgaagaggttgcagaagttgttcttgcagaatcaatccgttccattacctgggcg
aatgcgactaaggtagtatgtggaatgaatagtggctatgtcgttgtcgatgttcttact
cgggaggtggttgaagttgttagccctggcgcagttggtgccaatggccaaggcagtcga
ttcggtgctgtcagcacggctggaatgggctacgtgggcttgggaggatacacaccgaaa
ccgctggccgcgaagcttgcagatgggcagatgctacttgccaaggatatcaataccatg
ttcatcgatgatagtggcaagccacttgaaaagcgacaaataccttggccactggcacct
gagtcgattggatattcttatccgtacatcttggctttgcagcctcctgccaagggctcc
ttggaagttcgcaacccagatacgttgtctttgatgcaaactatatctcttcctggcgcg
gcacaactccatttccctccgccaacagtcagtttagcgcatgcaggcaaagggttccac
atatcaagtgatcgatgtgtatggaagatgggagccacagattacgattcgcaagtcgag
gagcttatccaaaatgccaactttgatgaagcgatcagcatcctgaatatgttggaagat
gcactgctgaagaacaaggtggaaactcttcgggaggtcaagatgctcaaagctgaaatg
ctgtttaagaagaaaaagttccgccaagcaatggatttgatgaatgaggacgatgttcac
gcccctccagagagagtcctgcgactataccctcccaagatatccgggagcttgtcgcaa
tgggcggaaactcgacatgaggatgcaactagcggacacggtgccatgactacaaatggt
gaaaggccgagtagccgagatgctgccactacaacggtctcaactgcaaatgttggcggc
ttcgcgaagctgttcctaggtggtcataagaaaactgcctcggatactgcttctgtcttg
tccaagaaggatggagttgatgtggaggacacacagactgccaaggatgcagaaagcgca
gaggacaagccacttgatagtaaggacctcaagaatgctgtcttggagctcaacagctat
ctggctggcaccagagcccggcttcagcggtatatcgacccggtcacaggcaagctgaag
gaccaggaagataaacaacgaccaattgaagaagcggcagagagattcctgagaacaacc
cagacagagtcggagcaaaagctggaagaacagctccggaatacgtttcgcttagttgac
acgacgttgttcagggcttacatgttctcacaaccttcattggcaggctctctgttccgc
ataccaaatttctgcgaccccgatgtcgtgaatgaggcgctactggagcataatagatat
accgagctgattgacttcttctacggcaaacggttgcacgtaaaggccttgagccttctt
catagattcggatcaccggtcaagcctgatgaagcagctcctagcctgcatgggcccgat
cgcacgattgagtacttgaaaaacctaccacccagtgagatagatttgatcattgagcat
gcgggctgggcgcttaagagcaacccaacgtatgctatggagatattcacgggagacacg
gaaaatgcagaaacgctgcctcgtgacagagtcgtctcgtttctgcatagcgttgaccct
caacttgagaggcagtacctggagcatatcatcaatgagctggatgacatgactcacgac
ttccacaaccgtttagttgagctttatgtggacactctaagacacatgaacaagaattgg
gcttgggacgagattatgagcaattttgtaacgttcctccgcgactctcggcaggtatat
agcttgacaaaggcactgggaatgattcccaaggacgacccgagtttctacgaggctcag
gctgtcattctgagcaacatgggacagcacaggaaggcattagagatctatgtatttcag
atgagggactatgcgaaggcagaggaatactgcaatcgcgtgcacaaatcgcaagacatg
gctgtaggaccatcgatgaactctatggaaaacgcatcgattgacacggatgacggcacg
caatcgatttatcatattctattatcgctgtacctcaaaccaccgccgctacacgaggtg
cagctaaaaccggccttagatcttctatcaaagcatggttctcgattaccagccacctcg
accttgagcttgattccagatgatcttcctgtcaactccctagaggcctacttccgcgga
cggatgcggtctgccaacagcttggtcaacgagagtcgaatagttgctggtctgcgaaag
gcggaacagattgccattgcagctcgcctgaatattggggacagtgaaatcaatggccag
ggtggacgtaacaggcatgtcaccatcactgacgagcgacactgtttcgtttgccacaag
aaactgggcggaggtatgcgaataggtggcagtgtcgtagctgtcttgccagataatacc
gtggtgcattatggctgtttaaacagagcactggggcaaaaggctgataattctcggccc
acaaaccgtggcagggatatgccgtttgcctaa
DBGET
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