Pochonia chlamydosporia: VFPPC_13485
Help
Entry
VFPPC_13485 CDS
T09407
Name
(RefSeq) ribosomal protein
KO
K15219
RNA polymerase I-specific transcription initiation factor RRN7
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_13485
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
VFPPC_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
ubiquitin
Ribosomal_L40e
Rrn7_cyclin_C
Rad60-SLD
Zn_ribbon_RRN7
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
28855254
NCBI-ProteinID:
XP_018147744
UniProt:
A0A179G0I0
LinkDB
All DBs
Position
2:4942959..4945967
Genome browser
AA seq
660 aa
AA seq
DB search
MEDRRELRRMPQGERCPECGSQRWYLEDGLRFCSRGHQIEGFIQFHVGDEEDAGKMGPVV
RREKERRETEKRQLAGQEGHSLFLEAIQLLLRKQVSFLVRIKGHAEELETVVRDLWDLRI
RGYSSNTMESNASDTQLEMFSSQPTSTDEEKNLSWNLRTRAQSWDPERGSDWPMPRLPET
IATCYLGCLLLRIPTRLGDLYTWVSNGNMPYLRAFQELPHEMQDRMPSAYANVMRLASRS
GLSGEELHRTVMDNVLSYKSNYDMTFPELNYIPMLIEYTKELCLPPETIVVARRLASSLG
LVFCFPTTKSRIYALDNPEVQIVSVLAVAAKMCFPFEISRLSLLDLTGCLLPSFSWETWK
SIFPREGSNLDQGAQEQNGFDNLTPNQITSMTDEDFDAYMTHLSASIDHSNNEDAVAQFF
PPEAQHAPPSPKMDASEGDVEERTRHVLAQSVKQRDGGKDGAISGKQGEMMYEAFRTVED
LSPISYAFYKAAGDVSGLSIDTMTRATYMLEHRITRSALRNFTIVSVTKSVKMQIFVKTL
TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGIIEPSLKALASKFNCDKMICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgccgtgagcttcgccgcatgccccaaggagaaagatgtcccgaatgtggg
agtcaacggtggtatttggaagatggcttaagattttgttcgagaggacatcaaattgag
ggttttatccaatttcacgttggcgatgaagaagatgctggcaaaatgggccctgtggtc
cggagggaaaaggaaagacgggaaacagaaaagcgccaacttgccggacaggagggacac
tccctcttccttgaggccattcagctgctcctacgaaagcaagtctcgtttttagtccgt
atcaaaggtcacgcagaggaattagaaacggtcgttcgagatctctgggatctacgcatt
cgcgggtacagttccaacactatggaatccaatgcgtcagacacacaactcgaaatgttc
agctcccagcctacttccaccgacgaggagaagaatttgtcttggaatttgcgaaccaga
gcccagagctgggatcctgaacgcgggtctgattggccaatgccccgattacccgaaact
attgcgacttgctatcttggctgtctcttattgagaatccctacaagattgggcgatctc
tacacgtgggtgtcgaatggaaacatgccttatttgagagcttttcaagagctgccacac
gagatgcaggatcgaatgccttctgcgtatgccaacgtgatgaggctggcttcacgctca
ggcttaagcggggaggaactgcacagaactgttatggacaacgttttgtcgtacaagtcg
aattatgatatgacgtttccagagttaaactatattcccatgcttatcgagtacacaaaa
gaactttgtctgcctcccgaaacaattgtagttgcaagacgacttgcatcgtctttgggc
cttgtgttttgctttccaacaacgaaatcaaggatttatgctcttgataatcccgaagtt
caaattgtctcagtcttagccgtagcggcgaaaatgtgctttccatttgagatctccaga
ctttctctcctagacctcacagggtgcttattgccttctttcagctgggaaacctggaag
agcatattcccaagggaaggctcaaacctggaccaaggcgcacaggagcaaaatgggttc
gacaatctgacgcctaaccaaatcacgagtatgacggatgaggattttgatgcctacatg
acacatttatcagcgtcaattgatcatagcaacaatgaggatgcagttgcccaatttttt
ccacctgaagcccagcatgcgcctccctcacctaaaatggacgcatcagaaggagatgtt
gaagagagaacccgtcatgttcttgcacaatctgtcaagcagcgtgatggaggcaaggat
ggtgccatttccggcaaacaaggcgagatgatgtatgaggcattccgcacagttgaagac
ctgtcacctatttcctatgcattttacaaagcagcaggtgatgtatctgggctgtcgatt
gacaccatgacaagggcgacatacatgttggagcaccggatcactcgttcggctctacga
aacttcaccatcgtcagcgtcacaaaatcagtcaagatgcagattttcgtgaagaccctg
acgggcaagaccatcacccttgaggtcgagtcctccgacacgatcgacaatgtcaagtcc
aagatccaggacaaggagggtattccccccgaccagcagcgactgatcttcgctggcaaa
cagctcgaggatggccgaactctgtccgactacaacatccagaaggagtccactctgcac
ttggtcctccgtctccgtggtggtatcattgagccctcgttgaaggctctggcctccaag
ttcaactgcgacaagatgatctgccgcaagtgctacgcccgtctccctccccgtgccacc
aactgccgcaagcgaaagtgcggacacaccaaccagctccgacccaagaagaagctcaag
taa
DBGET
integrated database retrieval system
