Pochonia chlamydosporia: VFPPC_13658
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Entry
VFPPC_13658 CDS
T09407
Name
(RefSeq) transcription factor spTFIIE alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_13658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_13658
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
VFPPC_13658
Prokaryotic type
Archaeal type
TFE
VFPPC_13658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7685
Motif
Other DBs
NCBI-GeneID:
28855426
NCBI-ProteinID:
XP_018145139
UniProt:
A0A179FTE3
LinkDB
All DBs
Position
3:<2207290..>2208732
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AA seq
429 aa
AA seq
DB search
MDLAVTLIKSVLRAFYPTRDILVMDALILHEALRDDDLAYLMAINTKDLHKICGKLREDR
FLTVHTRSELRQGNPRPSNRTWYYINYRHTIDAIKWRVYTIDKEVQGAPVPANEKKEYFC
NFCKAEWTAMEVLDSVGPNGFLCHRCHHTLTFEADRTSTGHEQSTRLNDQFKFISELLPK
IDSVHIPECDFDRALSKARPVVRDATHQRAATIAVESGTNRPMAVKGLTNTGPQSIAVNI
STAEGPSTAEKEADRARKEKIALQNALPSWMSNSTVTGESFSGALSDGVLALKPEDKGSA
APKGTVEDTNTSAQIDDIFERLKAEQAAEMAKGVKHGGNDEDFDSEEDDGDEDEFEDVPA
TGNPSSLGTPSTAALKRDASSVLSQDGDSADERARKKVKVEPEIKAEPRDSVDPDDTGDE
DEDMEFEDI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgcggtaactctcataaagtctgtattgagggccttctacccgacacgcgac
atccttgtcatggacgcattaattcttcatgaagccctccgcgatgacgacttggcttat
cttatggccataaacacaaaagatctacataaaatttgcggcaaactgcgggaagatcgc
tttttgactgttcacacgagatctgaacttcgtcaaggcaacccacggcccagcaatagg
acgtggtattatataaactatcgacataccatcgacgctatcaagtggcgagtgtataca
atcgataaggaagtccaaggagctccagttccagcaaacgagaaaaaggaatacttttgc
aacttttgcaaggcagaatggactgccatggaagttcttgacagcgttggtccgaatggc
ttcttgtgccatagatgccaccatacccttaccttcgaggccgaccgtacttccaccgga
catgaacagtctacgcgactgaatgaccaattcaaatttatcagcgagcttctaccaaaa
atcgactccgtccacattcctgagtgcgattttgaccgagccttgtccaaggcccgtcct
gtggttcgtgacgccactcatcaacgagccgcaaccattgccgtagaaagtggcacaaat
cgcccaatggctgtcaagggcctcaccaacaccgggccgcagtccatagcagtaaatatt
tccactgcggaaggtccatctacagcagagaaagaagccgacagggcccggaaggaaaag
attgcactgcaaaatgctttgccctcttggatgtcgaacagcacagtaactggcgaatcc
ttctccggcgccctgagtgatggggtgttggctcttaagccagaggataaaggcagtgct
gcaccaaaaggcacggtggaagataccaacacctcagcgcaaattgatgacatatttgaa
aggctcaaggctgagcaggctgcggaaatggccaagggggtcaaacatggtgggaatgac
gaggattttgactccgaggaggatgatggggacgaagatgaattcgaggacgttcctgca
acagggaatccatccagcctaggcacaccgagcaccgcggctcttaagcgcgatgcttcc
agcgtgttatcacaagatggggatagtgcagatgaaagagcgcgaaagaaggtcaaagtc
gagccagaaatcaaagcagaaccgagggatagcgttgaccctgatgacactggagatgag
gatgaggatatggaatttgaagatatttaa
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