Pochonia chlamydosporia: VFPPC_14246
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Entry
VFPPC_14246 CDS
T09407
Name
(RefSeq) coatomer beta' subunit
KO
K17302
coatomer subunit beta'
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_14246
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchm04147
]
VFPPC_14246
Membrane trafficking [BR:
pchm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
VFPPC_14246
Exosome [BR:
pchm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
VFPPC_14246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
NBCH_WD40
Nup160
DUF4982
MetallophosC
Motif
Other DBs
NCBI-GeneID:
28856009
NCBI-ProteinID:
XP_018142927
UniProt:
A0A179FKU9
LinkDB
All DBs
Position
4:complement(194697..197552)
Genome browser
AA seq
844 aa
AA seq
DB search
MKLDVKRQLYARSERVKGVDFHPQEPWILTTLYSGHVYIWSYETQQTVKTFELTEVPVRA
GRFVARKNWIVCGSDDFQIRVYNYNTSEKVAQFEAHPDYIRAIAVHPTLPFILTASDDMT
IKLWDWDKGWKCVQVFEGHSHYVMGIAINPKDTNTFASACLDRTVKIWSLGSSTANFTLE
AHESKGVNHVDYYPHSDKPYLLTTSDDRTVKVWDYTTKSLIATLEGHTNNVSFACYHPEL
PVIVSGSEDGTIRIWHANTYRFEQSLNYSLERAWCVSYQKGKQGIAVGYDDGAVVVKLGR
EEPAVSMDASGKLIWARHNEVVSSIIKGDASIKDNEPISLPTKDLGTCEVYPQTLIHSPN
GRFVAVCGDGEYIIYTALAWRNKAFGSALDFVWGSKENSNDFAIRESAMSVKIYKNFVEK
SGGLDVGFQADGLTGGILLGVTGQGGISFFDWATGGLVRRIEVEPKHVYWSESGELVAIA
CEDSCYVLRFSRENYVEAVQAGQVEDDGVEAAFEVITDISETVRTGEWVGDCFLYTNSTN
RLNYLVGDQTYTVSHFDKPMYVLGYIQRDSKIYLADKDVNVTSFALSLPVLEYQTLVLRE
DMETAAELLPTIPNDQLNKIARFLEGQGHKELALEVASDPEHKFELALALNQLDTALELA
RAADVEHKWKTVGDSALAAWDVALAAECFTHAKDMGSLLLLHSSTGDREGLSALAKQAQD
ANAHNIAFSCSWLLGDVDNCIEILTKTGRLAEAVLFSQTYKPSSTTPIVREWKESLEKSK
KGRVAKLIGVPEDDDDLFPQWDAWLKAETEGGSVADIPAETNGNEADADEEEKPDAEEEE
EDDE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggacgtcaagcgccagctgtacgctcgcagcgagcgagtgaagggcgtcgac
tttcatcctcaggagccgtggatcctcactacactctatagcggccatgtctacatttgg
tcatacgagacccaacaaacggtcaagacattcgagctgaccgaggtacctgtccgggct
ggccgattcgtcgcacgcaagaactggattgtgtgcggctccgatgatttccaaatacgc
gtgtacaactacaacacctcggaaaaggttgcccaattcgaagcgcaccccgattatatc
cgcgccattgctgttcacccaactcttccattcatcttgaccgcgtccgatgatatgaca
atcaagctgtgggattgggacaagggctggaagtgtgtccaagtctttgaaggacacagc
cactatgtcatgggtatcgccatcaatcccaaggacactaacacctttgcctctgcatgc
ttggatcgcaccgtcaagatttggagccttggttcctccaccgccaacttcactctggaa
gctcacgagagcaaaggtgtcaatcacgtcgactactaccctcactccgataagccttat
ctcctcaccacttccgatgatcgaactgtcaaagtctgggactacaccactaaatccctg
attgctaccctcgaaggccacaccaacaatgtatccttcgcttgctaccaccccgaactt
cctgtcattgtgtctggttccgaggacggcactattcgcatctggcatgcgaacacctat
cgattcgagcaatctttgaactatagtctggaacgggcatggtgtgtctcttatcagaag
ggtaagcagggtatcgctgtaggttacgatgatggcgccgtcgtcgttaaattgggtcgt
gaggagcctgcggtctccatggatgcctcgggtaagcttatttgggcgaggcataatgaa
gtggtgtcttctataatcaagggggatgcctcgatcaaggataatgaacccatctcactt
cccaccaaggatctgggcacatgtgaagtgtacccccaaactttgatccattcaccgaac
ggccgattcgttgcggtttgcggagatggcgaatacatcatttacaccgctttagcctgg
cgtaacaaggcttttggatctgctctggactttgtctggggttctaaggagaacagcaac
gactttgccattcgtgagtcggcaatgagcgtcaagatctacaagaattttgtggagaag
agcggcggtctcgatgttggcttccaggctgatgggcttactgggggtattcttttgggt
gttactggacaaggcggcatttcattcttcgactgggccaccggcggtttggtacgcagg
attgaagttgagcccaagcatgtctactggtcagagagtggagagttggttgccatcgct
tgtgaagacagctgctatgttctgcgattctctcgggagaactatgtcgaggctgtccag
gccggccaagttgaagatgatggtgttgaggctgcattcgaagtcatcacggatattagt
gagaccgtccgaactggcgaatgggtaggagactgcttcctgtatactaacagcaccaac
cgcttgaattatctggttggtgaccagacctacactgtatcacacttcgacaagcccatg
tacgtcctgggttacattcaacgggactcaaaaatctacttggcagacaaggatgtgaat
gtcacatcgtttgctctctcacttcccgttcttgagtaccagactttggttcttcgagaa
gacatggaaacggctgccgagctgctacctaccattcctaacgatcaacttaacaagatt
gcgagattccttgagggacaaggccacaaggaattagccctggaagttgccagtgaccct
gaacacaaattcgagcttgctctcgcattgaatcagctggatactgccctagaactggcc
cgagcggccgatgttgaacataagtggaaaaccgttggtgactctgcactggctgcctgg
gatgtcgccctggccgcagagtgcttcactcacgccaaggatatgggatcccttcttctt
ctgcactcatcaactggagacagggaaggtctctccgctctggcgaagcaagcacaagac
gccaacgcccacaacattgccttctcttgttcatggcttctgggtgatgtcgacaactgc
atcgaaattttgaccaagaccggacgactggccgaggctgtcctcttttcgcaaacatac
aagccaagttctaccactcccattgtgagggaatggaaagagagtttagagaaatctaag
aagggccgagtagcgaagctcattggtgttcccgaggatgacgatgatttgttccctcaa
tgggacgcgtggttgaaggccgagaccgagggcggctcagtagcagatatcccggcagag
accaatggcaacgaagcagatgctgatgaggaagagaagcccgatgcggaagaagaggaa
gaggatgacgagtaa
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