Pochonia chlamydosporia: VFPPC_14357
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Entry
VFPPC_14357 CDS
T09407
Name
(RefSeq) RSC complex subunit (RSC1)
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_14357
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_14357
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
VFPPC_14357
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VFPPC_14357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
TFIIA
CDC45
DUF7877
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
28856120
NCBI-ProteinID:
XP_018143754
UniProt:
A0A179FMV1
LinkDB
All DBs
Position
4:<2530424..>2533524
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AA seq
921 aa
AA seq
DB search
MSLQHGFTPDDATGSIEVKEADQDIEMQDSSSGANTDAEGEVVEDGNQHMFHTIQQLTAY
LSTVEEDGEELAAGFQRLPNRRSLPDYFEVIADPVAFSTIRGKIQKKQYSTFAEFVKDVA
QICHNAQVYNRPSAPIFGAAVRLREIFHEELQKLVTKGDVSSEDAKLPDLGELPPAEESP
SLRSDEGEDDDDEDDEEDEEEDDDEDEDGAESSDDDGGRRKRRGVRGRRQQSFTKPKDQE
DDKEDDAYKKRGRPPMVQTPMEARISSILRGLRKFKDERGGLLVSPFEKLPDKVTMADYY
QNISHPIALDHIKKKAKRKKYRNVDDLLKDIDLMFENAKLYNEDDSPVYLAATELQTQSR
ILAEQERAKPDDDFRDEDGKLPLSEIQHIGQSWKVGDWVHIRNPNDLAKPIVAQIFRTWQ
DRAGQKWINACWYYRPEQTVHRFEKHFFENEVVKTGQYRDHQINELLDRCFVMFVTRFNK
GRPRGLASDKDVYVCESRYNEEKFRFNKIKTWASCVPDEVRDRDYEMDLFEAPRRMRKVP
SPIKHLLREDAKDTDDLPRPTWGSPNAPPIVGAVHRRPPEANESPPPEPTPPPPLIPAAR
NMSSESAPRLSAASVTPELSMDPAARFQQGTFSGHGPSPSPANQYGMQATGHFQPVTPAA
GGHVMQQTHIPIPQAQQAMATPQMSMRSVQYQQQQQQQQQQQQQQQLPQQQPQTGYAQNF
GSTYSQTAAAFTPHPPMANQTAAHYGQQLQHGRMQYNTSGGGGGGGGGNPTNAYNPPRPP
EVYTLPENVNEALHSQIRQGFQHDGAGRVLFFVGPPLDRSYKRLSPPSGGLGHSVKYLAG
RESWLAERERKRQRRNQVQDSKFKQSRKTTYSPVPAKEEVTVQASSAINQWFQKFNKEGP
KWDHDVGLDGWSEGRRKQESC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaacatgggttcactccagatgatgcgacgggctcgatcgaggtcaaagag
gcagaccaggatatcgagatgcaagatagctccagcggcgcaaataccgatgcagaaggc
gaagtagttgaagatggaaatcaacatatgttccacactatccagcaactcacagcgtat
ctttccactgttgaggaagatggcgaggaactagccgcaggttttcaaaggcttccaaat
cgacgatcactccctgattattttgaagtgattgccgatcctgttgccttcagtaccatt
cgaggaaaaatacagaagaaacaatactcgacctttgcggaatttgtcaaagatgttgcg
cagatttgccacaacgcccaagtgtacaatcgcccatcagcaccgatatttggtgcagcg
gttcgcttacgagaaatattccacgaggagcttcaaaagcttgtcacaaaaggggacgtg
tcttcagaagatgcaaagctgcccgacttgggcgagcttccacctgcagaagaatctccg
tcgcttcgatccgatgaaggcgaagatgacgacgacgaagatgacgaagaagatgaagaa
gaagatgatgatgaggatgaggatggagctgaatcctcagacgatgatgggggccgacgg
aagagacgtggggtacgcggtcggcgacagcaatccttcactaagccaaaagatcaagaa
gacgacaaagaagatgatgcgtataaaaagagaggcaggccacccatggttcagacgcct
atggaagcccgcatctcttcaattctgcgaggacttagaaagttcaaggacgaaagaggc
ggtcttctcgtatcgcctttcgaaaagttgcccgacaaggtaacgatggctgattactat
caaaacatcagccatcctattgctttggaccatatcaagaaaaaggcaaagcgaaagaag
tatcgcaacgtggatgaccttcttaaagacattgacttgatgtttgagaatgctaagctc
tacaatgaagatgatagtcctgtataccttgctgccacggagttgcaaacccagtcgcgt
atactggctgaacaagagagggccaagcctgatgacgatttcagagatgaagatggcaag
cttccgctctctgaaatacaacatattggacagagttggaaagttggagactgggttcat
atacggaatccgaacgaccttgcaaagcccattgtcgcccaaatattcaggacctggcaa
gatcgcgcgggccagaagtggattaatgcctgttggtattaccgccctgagcagactgtt
catcgattcgaaaagcacttcttcgaaaacgaggtggtgaaaacgggtcaatatcgagat
caccaaataaacgaactacttgatcgatgttttgttatgtttgtgactcgattcaataaa
ggccgtccaagagggttggcatctgacaaggatgtctatgtttgcgagtcacgctacaat
gaagaaaagtttcgcttcaacaaaatcaagacatgggcaagctgcgtgcctgatgaagtg
cgagacagagattatgagatggatttatttgaagcaccacgccgcatgagaaaggttcca
agccccatcaaacatctcttgcgagaggatgcgaaagataccgatgacctcccacgacca
acctggggaagccccaacgctccacctattgttggtgcggttcatcgacggccgcctgaa
gcaaacgaatcccctccacctgaaccaacacctccaccacctcttataccagccgcaagg
aatatgtcttccgaatccgccccacgtctgtccgcagcgtccgtaactccagaattgtct
atggacccggcagcgaggtttcagcaaggtacattttctggccatgggccttccccaagt
ccagccaaccaatacggcatgcaagctacaggtcattttcaaccagtgacacccgcagct
ggtgggcatgtaatgcaacagacacatattcctatcccgcaagcccagcaagccatggca
actcctcagatgtcaatgcgttcagtgcaatatcagcagcagcagcagcaacaacaacaa
caacaacaacaacaacagctaccacagcagcagccgcagacaggatatgcacagaacttt
gggtctacatactctcaaacggcggccgcgtttactccccacccaccaatggcaaatcaa
actgcagcgcattatggacaacagctccaacatgggcgaatgcaatacaatacatctggt
ggtggtggtggtggtggtggtggtaatccaactaacgcctacaatcctccacgaccgccc
gaggtgtatactctaccagaaaatgtgaatgaagcccttcattctcagattcggcaaggc
ttccaacacgatggtgctggacgagttttgtttttcgtcggcccacctttagacagatca
tataagcgactatctccaccgagcggagggcttggccacagcgttaaatatctcgctgga
cgtgaatcgtggctagctgaacgtgagagaaagcggcaaagacggaaccaagttcaggat
tccaagttcaagcaatctcgtaaaacaacctacagtccggtgccggccaaagaagaagta
actgttcaggcatccagtgcaatcaatcaatggttccagaagttcaataaagagggccct
aaatgggatcatgacgttggattagatggatggagtgaggggcgacggaagcaagaatcg
tgttaa
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