Pochonia chlamydosporia: VFPPC_14532
Help
Entry
VFPPC_14532 CDS
T09407
Name
(RefSeq) Homeodomain-like protein
KO
K15217
RNA polymerase I-specific transcription initiation factor RRN5
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_14532
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
VFPPC_14532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
28856294
NCBI-ProteinID:
XP_018140782
UniProt:
A0A179FCJ0
LinkDB
All DBs
Position
6:1588638..1590350
Genome browser
AA seq
570 aa
AA seq
DB search
MDSDEEYAVDEQSVAEHESDFAYTELDEVQGVYSTVNQSDRESSYLPSDQSIDLRTRQAL
SQDEREGSRSPLKRPAKQARVHRPFKRQKGILNTEYIDLLNRDIDDAAHRVCLDETVDLP
GSQLGLTTWSAVEKQQFFESLSRLGRYDLPGIAARIGTKSEIEVKQYIHLLHTTQERRAD
FNRRSYLESAEYPAAVEISQQCCHAQEEVADAISVRQERSEQQREAKKWGGNWDITPSIA
RRLTRRGEEGVSTSESTLRFAQLFHLSNWLKLSERVFMNSSIPGSNWNNIDDRHPSMWAT
ALDDFHSLAVSVTRRLVQSTLFISMSRIRAKKELIPTTREIVRAKDVEAAVASLGMMHNS
NNLWIKAARRLRLDVYEEPPDRDDEDIEEEPMDYEEVEAALSGDTNADESRSPQGRILKI
EGLSGDDLDDDDEEDNYDTGVDSEGGFKQEIDEEEDEITHEANEILWYSAPELKDIQAAK
EALKLRITMERKQEAEAALHDEYASYQAEMEMWNILQKRPPMEPPKVQDPGRVHRSNVGV
EDVYPLGRNWATKLEYYGEWETLDTEKQKE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactctgacgaggagtacgccgttgatgagcaaagtgtcgccgaacatgaatccgat
tttgcatatacagagttggatgaagtccagggagtttactcgaccgtgaaccagagtgat
agggagagctcataccttccaagcgatcaatccatcgatctcaggacaagacaagcctta
tctcaagatgagcgagagggcagtcggtcgcctttgaagcggccggccaaacaagctcgg
gtacatcggccgttcaaacggcaaaagggtatattgaataccgagtatatcgaccttctc
aatcgagacatcgatgacgccgcccaccgggtgtgtttggatgaaaccgtggacttgccc
ggttctcagctcgggctcaccacttggtcagctgtagagaagcaacaattttttgaatct
ttatcacgtctgggaaggtacgacttacctggaatcgcagccagaatcggtaccaagagt
gaaatcgaggtcaagcagtacatccatttgttgcacacaacccaagaacgcagggcggat
ttcaaccgtcgatcatatctggagtcagcagaatatccggcagccgttgaaatcagccaa
caatgctgccatgcccaggaggaggtcgcagatgcgatttctgtgcgccaagaacggagc
gagcagcaacgagaggcgaaaaaatggggagggaactgggatattacgccttccattgcg
cgaagattaactcgtcgcggcgaggagggagtttcgacatccgagtcgacgttgagattc
gctcagctgtttcacttgtccaattggctaaagctgtcagaacgggtatttatgaattcc
tcgattcctggaagcaactggaacaacatcgacgatagacacccgtcaatgtgggcaacc
gctctcgacgactttcactcactcgctgtatccgtcactcggcggctcgttcaatcaact
ttgttcattagcatgtctagaatccgagcgaagaaagagctcatccctaccacccgggag
attgtgcgggcaaaagatgttgaagctgcggtggcctcgctcggcatgatgcacaactcg
aacaatttgtggattaaagccgcaagaagattgcggttggatgtgtatgaagaaccgcca
gatagagacgacgaggatatcgaagaggagcccatggattatgaggaggttgaagctgcc
ctctctggtgacaccaatgcagatgaatcccgttccccccaggggagaattctcaaaata
gaaggtctctccggtgacgatctggacgatgacgacgaagaagacaattacgacacaggc
gtcgattccgaagggggttttaaacaggaaatagacgaagaagaagatgaaatcacacac
gaagcgaatgagattctgtggtattctgcccccgagttgaaagatatacaagctgccaag
gaggcgctcaagctgcgaatcaccatggagaggaagcaagaagcggaagctgcgttacat
gacgaatatgcaagctaccaagcagagatggaaatgtggaatattctgcagaaacggcca
ccgatggaaccgcccaaagtgcaggatccagggcgcgtgcatagatcaaacgtgggcgtg
gaggatgtctaccctcttggaagaaattgggctaccaagttggagtattatggagaatgg
gagacgttggataccgagaagcagaaggagtag
DBGET
integrated database retrieval system