Pochonia chlamydosporia: VFPPC_16229
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Entry
VFPPC_16229 CDS
T09407
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_16229
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_16229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_16229
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_16229
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
VFPPC_16229
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VFPPC_16229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
28857976
NCBI-ProteinID:
XP_018141862
UniProt:
A0A179FGS6
LinkDB
All DBs
Position
5:complement(1665030..1665601)
Genome browser
AA seq
136 aa
AA seq
DB search
MAGCNPKHFNTQDTFELFLLSEGEKRIEEKVYSGMSNTSDFILNKEDHTLGNLLSEHIKA
HPNVYMAGYKLGHPNVPQLFIRVQTDGTKTPREVFTAVCEKLINQLESLHQEFTREWELR
RITNTGEQGNLQGNGF
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggccggctgcaaccccaagcacttcaacacccaagacactttcgagctcttcttgctg
agcgagggagagaagaggattgaagaaaaagtgtactctggcatgtccaacacctcagac
ttcattttgaacaaagaggaccacactctcggcaacctcttatctgaacatatcaaggct
caccctaatgtctacatggctggttacaaacttggccaccccaacgtaccccagctcttc
attcgtgtacaaacagatgggacgaaaacccctcgcgaggttttcaccgctgtctgcgaa
aagctcatcaaccaactagaatcgctgcaccaggaatttacccgtgaatgggagctccga
cgtatcacgaatacgggagaacaaggtaacttgcaagggaatggcttctaa
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