Pochonia chlamydosporia: VFPPC_16628
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Entry
VFPPC_16628 CDS
T09407
Name
(RefSeq) DNA polymerase subunit Cdc27
KO
K03504
DNA polymerase delta subunit 3
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03030
DNA replication
pchm03410
Base excision repair
pchm03420
Nucleotide excision repair
pchm03430
Mismatch repair
pchm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFPPC_16628
03410 Base excision repair
VFPPC_16628
03420 Nucleotide excision repair
VFPPC_16628
03430 Mismatch repair
VFPPC_16628
03440 Homologous recombination
VFPPC_16628
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchm01009
]
VFPPC_16628
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_16628
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_16628
Protein phosphatases and associated proteins [BR:
pchm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
VFPPC_16628
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
VFPPC_16628
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
VFPPC_16628
MMR (mismatch excision repair)
DNA polymerase delta complex
VFPPC_16628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
28858375
NCBI-ProteinID:
XP_018139944
UniProt:
A0A179FAA6
LinkDB
All DBs
Position
7:742954..744543
Genome browser
AA seq
435 aa
AA seq
DB search
MDEHRKFLADRLLSEGRPISYRALSASLDVHVNKAKGILFDFHQYQNGMQANSIHATYLV
CGVVASASRAVDNAEMDDSPRHSDTLTPLASPKKLTLVGEENLQEVLDIYESITSIHLYA
LSPMAKKAFWFCEESVYQGNDGGAVYKKNTGLHHKLGVVTNPHLRLRDRNTHHTPALSST
ARPPIEEDEQVHQDKKNITGPSSTAKRLPTAHKKEAIGTVNREKPNSILKSFAKANIHVP
GKVTSQVKQDDGPAALSDDGEPDDWDIVPSKPTSDSHSITKSRRDREDALRRMMEDEDDE
DDEAQPVESAALVNDNVEMTESPVPEASPGAEPTPEKLSITQVDKEPSEILSSTGDGRRR
GKRRVMKKKRILDDQGYMVTIQEPGWESFSEDETSPPAKKPTSATGPTQSSSSAKTKMAS
LKGSQGSIMSFFAKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacacagaaagtttctggcagatcgcctgctgagcgaggggcgaccgatctcc
taccgagccctaagcgcctccctcgatgttcatgtcaacaaggcaaaaggcatactcttt
gatttccaccagtatcaaaatggaatgcaggcaaactcgatacacgcaacctacctcgtc
tgcggtgttgttgcttcagcaagtagggcggtggataacgctgaaatggatgactcgcct
cgccattcggatactttaacaccgttggcgagccctaaaaagttgacccttgtgggcgaa
gagaatttgcaagaggtgttggacatttatgaaagcattacgtcaattcatttatatgcc
ttgtcacctatggcgaagaaagctttctggttttgtgaagaatcggtctatcaggggaac
gatggcggtgcagtctacaagaagaacactggcctgcaccacaagctcggagttgttact
aatccacacctccgtctgcgagatcgcaacactcatcataccccggccctttccagtact
gcgcggcccccaattgaggaggatgagcaagtccatcaggacaagaagaacataactggc
ccatcgtcgacagccaagcggctgcctaccgcacataagaaggaggcaattggtaccgta
aatcgagagaaaccaaactccatactcaaatcatttgcgaaggccaatatccatgtccct
gggaaggttacaagccaagttaagcaagatgatgggcctgccgcgctttcagatgatgga
gagcccgatgactgggacattgtgccctccaaacccacctccgattcgcactccatcacg
aagtcgcgcagagatcgagaggatgctttaagacgtatgatggaggacgaagatgacgaa
gatgacgaagcacaaccggttgaatcagccgcactcgtaaatgataacgtcgagatgacg
gaaagccctgtgcccgaagcctctcctggagcagagcccacacccgagaagctgtcaatc
acccaggtcgacaaggagccttcggagatactttcaagtaccggagacggccggagacgg
ggtaagcgtagggttatgaagaagaagcgaatcctggacgatcagggttacatggtcacc
attcaagaacctgggtgggagtccttttctgaggacgaaacttccccgcccgccaaaaag
ccaacctctgcaactggaccgacacaatcttcatcatctgctaagacaaagatggcgtct
ctgaagggctctcaaggcagcatcatgtctttttttgccaagaaatga
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