KEGG   Pochonia chlamydosporia: VFPPC_17857
Entry
VFPPC_17857       CDS       T09407                                 
Name
(RefSeq) CFIA complex component Rna14
  KO
K14408  cleavage stimulation factor subunit 3
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VFPPC_17857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_17857
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     VFPPC_17857
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_14 HAT_Syf1_CNRKL1_C UTP6_C
Other DBs
NCBI-GeneID: 33936763
NCBI-ProteinID: XP_022285413
UniProt: A0A219AQ78
LinkDB
Position
4:complement(1971069..1974218)
AA seq 984 aa
MASDDSAWDGEGASGVEYDPLAQPSVDLEQSAQSSEAASESAENIGENEEEQDDGAEYDP
ESVGLDPPSHEMDNNSASATPSQKPAKPKMSGGFLVEASDDEDDVGHNAPSGAQNSALGH
VSQTSNGGTPASNAATPNVLPGMVGVDPVALLEARIQEDPRGDMDAWINLIADHKRRSRT
DDLRRLYNRFLEVFPQAADIWVAWIEVELNLDNFVDAEQLFGRCLMSVPNVKLWTLYLNY
IRRRNDLTNDPTGQARRTVTQSYEFVIDNIGVDRDSGNIWQDYVQFIKNGPGQVGGTGWQ
DQQKMDQLRKAYHRAITVPMSTVNTLWKEYDQFEMGLNKVTGRKFIQERSPGYMSAKSAN
IALDNITRNLKRENLPRLPPAPGFDGYEEFHAQVDMWRRWIAWEKEDPLVLKDEEPKVYS
QRILYCYKQALMALRFWPEIWVNAAAWCFEADIRENEKVLGTELLLQGIGANPESVLLAF
KHADHIEANYPEKEGDKSEYAKAVRQPYDTVLDTLYKMGDKVKEREKLEVNTLKQAAALE
PPVQESIEANDDDDEEEKTVRKSPTEERIAAIQQAYSAESQLLSKTISYVWIAMARAMRR
IQGKGSQTEGGLRKVFTDARQKGRLTSDVYVAVALLESVVYKDPVGAKIFERGARLFPND
AGFMIEYLKYLHSKDDTTNARVVFETCVNRLISKPETLPKAKQLYAYFHKYESQYGELSQ
ISKLEARMAELFPADPKLNYFTSRYSSDNFDPVAAPIIISKAVQMRPKLLVPIIEQPASA
RESIPPPRQEQSPRPQYIRATASPKRPFGIEDEELNPPKRVARGVSPLKGAAGRRLDQQR
RNQTSALHRDITFLLGILPPAHTYDTTRLNPINMVSLLRDTQLPDYASWKAKTGGQYRVS
SGPSHGRQTSGDFGNRPISPYGRMAAAAGGYRNSPLRAESGGAYAANPYAPPPDVSGTAP
SWQPPATGTYGAPPPAGQYGGYRY
NT seq 2955 nt   +upstreamnt  +downstreamnt
atggcgtccgacgattctgcctgggatggcgaaggggcctctggtgtggaatacgatcct
ctcgcgcagccaagtgtagacctggagcaatctgcgcaaagttcggaagctgccagcgaa
tctgccgagaacattggtgagaacgaagaggaacaagatgatggggcggaatatgaccct
gaatcagtcggtctggatcccccttcacacgaaatggacaacaactctgcgtccgccaca
ccgtcacaaaaaccggctaaacctaagatgtcaggtggttttttggttgaagcatcagat
gatgaggacgatgttggccacaatgctccttccggagcacaaaactcagccttgggccat
gtcagtcaaaccagcaatggtggtacgcctgcctctaatgcagcaacccccaatgtattg
ccaggcatggttggggtagatccagtggcacttttggaagctcgaattcaggaggacccg
cgtggagatatggatgcgtggattaatcttattgccgaccacaaacgtcgcagtcggaca
gatgacctccgtcgactctacaatcgcttccttgaagtatttccccaagcggctgatatt
tgggttgcatggattgaggtggagctcaatctcgataactttgtggatgctgaacaactc
tttggtagatgcctgatgtctgtaccgaatgtcaagctttggacgttgtatctcaattac
attcggcgccggaatgacttgacaaatgacccaactgggcaagctcgacgcaccgtcacc
cagtcttacgaatttgtcatagacaacattggcgttgaccgtgattcgggcaatatctgg
caagactatgtccaatttatcaagaatggtcctggtcaggttggtggcacgggatggcag
gatcagcaaaaaatggatcaactccgcaaggcctatcatcgtgcgatcactgtccctatg
tctaccgtgaatactctgtggaaggaatatgatcaatttgaaatgggcttgaacaaagta
accggtcgcaaattcattcaagagaggtcgccggggtatatgtctgccaaaagtgccaac
attgctctggacaacatcacccgaaacttgaaacgagaaaatcttccacgattgccccct
gctccgggttttgatggctatgaagaattccatgctcaggttgatatgtggaggaggtgg
attgcctgggagaaggaagaccctttggttctcaaggacgaagagcccaaagtgtacagt
cagcgaattctatattgttacaaacaggcattgatggctctacgcttctggcccgagatt
tgggtcaacgctgctgcttggtgcttcgaagctgatatccgagaaaatgagaaagtcctc
ggtaccgagctactacttcagggcataggcgctaacccggagagtgtgttgcttgctttc
aaacacgcagaccatatcgaagccaactatcctgagaaagaaggggacaagtctgaatat
gcgaaagcggtacgccaaccttacgacaccgttttggataccctctacaaaatgggagac
aaggtgaaggagcgggagaagctcgaggtcaatactctcaagcaggcagcggcgctggaa
cctccggtccaggaatccattgaggcaaatgatgatgacgatgaagaagagaagaccgtc
aggaagtcaccaacggaagagcgtatcgccgctattcagcaggcctattctgcagagtca
caactcctttccaagaccatttcctatgtttggattgcgatggcccgagccatgcgccgt
attcaaggcaaaggtagtcaaaccgagggcggattgcggaaggttttcaccgacgcgcga
caaaagggtcgcttaacgagtgatgtctatgtcgctgtcgcattgctggagtcagtcgtc
tacaaggacccagttggtgcaaaaatattcgagcgtggcgcaagattatttccgaatgat
gcaggctttatgattgaatacctgaaatatttgcactccaaggatgataccaccaatgcc
cgcgttgtttttgagacatgtgttaatcgattaatatctaagccagagactttgccaaag
gccaagcaactctatgcctactttcacaaatacgaatcgcaatatggagagctgtcacag
atctcgaagctagaagctcgaatggcagaacttttcccagccgatcccaagctgaattac
tttacttcgcgatactcatccgacaactttgatcctgttgccgctccaatcatcatatct
aaagccgtacaaatgcgaccgaaactactagtaccaatcatcgagcagcccgcatcagcc
cgtgaaagtatcccgccgcccaggcaggaacagagcccacggccacaatatatccgagcc
accgcctccccaaagcgtccattcggcattgaggacgaagagctcaatccgccaaagaga
gtcgctagaggcgtttctccattgaaaggtgctgcgggacggcgtctcgaccaacagcgg
cgtaatcaaacgtcggcacttcatcgagacattacgttcctcctaggtatcttgcctccc
gcacacacgtatgacacgacgagacttaaccccatcaacatggtttcgctgcttcgcgac
acccagctacctgattatgcttcatggaaagccaagacgggtggtcaataccgtgttagc
tctgggccatctcacggcagacaaacatctggagactttggtaaccggccaattagccca
tacggacgcatggctgccgccgcaggaggatatcgaaactcaccactgagggcagagagc
ggaggtgcgtacgcagcaaatccttatgctccaccaccggatgtcagtggcacggctcct
tcatggcagcctcctgcaactggcacatatggagcaccgccgcctgcaggacagtacgga
ggttataggtattaa

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