Penaeus chinensis (fleshy prawn): 125024909
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Entry
125024909 CDS
T08118
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125024909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125024909
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Pre-60S particles
GTPases
125024909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125024909
NCBI-ProteinID:
XP_047468631
LinkDB
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Position
4:complement(3329581..3346991)
Genome browser
AA seq
1124 aa
AA seq
DB search
MVIGSRYLTSQLPTLMGNPQNIRNLCIMAHVDHGKTSLADALVASNGLINKRLAGRIRYM
DSRKDEIERGITMKSSCVSLAYNKDEQDYLINLIDSPGHVDFSSEVSTAVRLCDGTIIVV
DVVEGVCAQTKVVLQQAWMENIRPVLVLNKIDRLILETKLSPIDCYYHIAQVLEQVNAYM
AELYNTALLGKTALEIEKYQEAERERKVSERERKASECDATNSDLLFSDWGIETEDDSDL
YFMPEQGNVVFASAYDGWGFSIHHFADQFAAKLGMNKAVLNKTLWGDYYITTKGGQKKIV
GGARDKRKNPLFVALILENLYKVYDTVVTRKDMSETVKLSEALGVKLPMSVAKSTDTRLK
LNFLCSSWLPLASAVLDMVIDHLPSAANMTEERATKLMCSATQRFDTLPSESQKLKDAFM
KCQSEEDDPLIVYISKIYGVQRKNLLDSTSSGKKTVATGSIGLLSEGEIASRREEIRRRR
EEITANGEQKASGERQLTPSEIEELQKQQDKMAEDREKADAERKKWIEEEVFVAFARVYS
GRLKARQKVYILGPKHDPSVVLAQLGEGKQLSEENIGEFKHIHICEIADVYLLLGRELEQ
IAYATSGTVVGITGLEDYVIKSATLSSTYTMPAFTELTLNVTPILRVAVEPHDPRDLPKL
RRGLKILNQADPCVQVKLQDSGEYVIITAGEVHLQRCVDDLQERYAGIPIRTSDPIVPFR
ETIIPPPTVDRLNEAIEGENISQKKPLNGDPLGVVEVSGHYGKLRCRAVPLPEQVTKLLE
EYQDLLKSISKIGAVVNTSDALEKKDSHTIIEGSDMVSDQGNTMKMGALVQALENREKLN
QETFAAIQDLKKKLDKAFKEAGNEWENAINQIWSFGPQGCGPNILLNCIQSYPRPSIWEK
STSVDSPLAAFDTNFVTGFQIATSAGPLCEEPMMGVCFIVEDWSIKPTDSSNEDAGANSV
SSGQIISLAKDTLRKAFDKQCQRLVCAMYSCVISVTSEVIGKMYSVIGKRQGRIVDGDIT
EGSTSWNVTAYLPVVESMNFANELRKSTSGEAVPQLVFSHWETLDIDPFWEPHTTEELAH
WGEKADRENLAQKYINSVRRRKGLAVDEKIVEFAEKQRTLSKNK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggtgattggtagcagatatttaacctctcagttacccactctgatgggcaacccacaa
aacatccgcaacttgtgcattatggcacacgttgaccatggcaagacctccctagcagat
gctcttgtggcttcaaatgggctgatcaacaagaggcttgctgggcgcatcagatacatg
gacagtcgcaaagatgaaatagagagggggatcacaatgaagagttcttgcgtttctttg
gcctacaataaagatgaacaagattacctgatcaacctgattgattcacccggccatgtt
gacttctcatctgaagtctccacagctgttcgactctgcgatggaaccattattgttgtt
gatgtcgtggaaggagtctgtgcacagacgaaggtggttttacagcaggcttggatggaa
aacatccgtccagttcttgttttaaataaaatagaccgtctaattctggaaacaaaatta
agcccaattgactgctattatcacattgctcaagttttggaacaggttaatgcatacatg
gcagagctgtacaatactgctctccttggaaagactgcactagaaattgagaagtaccag
gaagcagaaagggaaaggaaggtttcagaaagagaacgcaaggcatctgagtgtgacgcc
accaattctgacctcctgttttccgactggggcattgaaacggaggatgactctgactta
tacttcatgccagagcaaggcaatgttgtgtttgctagtgcatatgatggatggggattt
agcatccatcactttgctgatcagtttgcagcaaaacttggaatgaacaaagctgttctt
aacaagactctttggggagactactacattacaacaaaaggtggacagaagaagattgtc
ggtggtgcacgagataaacgcaagaatccactgtttgttgctcttattcttgaaaatttg
tataaagtgtatgacactgtagtgacacggaaggatatgtctgaaacagtaaagctttca
gaggctttgggggtcaagctgccaatgagtgttgcaaagtcaactgacacaagattaaag
ctgaattttctctgtagtagctggctaccactggcatctgctgtgttagacatggtgata
gatcacctccccagtgctgcaaacatgacagaagaaagagcaacgaaacttatgtgttca
gccactcagcgatttgacaccctgccctcagagtcccaaaaactcaaagatgcttttatg
aaatgtcagagtgaagaggatgatcctcttatagtttatatttcaaagatttatggagtt
caaagaaagaacttgttggactcaacctccagcggaaaaaaaacagtagctacaggcagc
ataggcctcctgtcagaaggggagatagccagccgtagggaggagatacgccgcaggaga
gaggaaattacagcaaatggcgagcagaaggcatctggtgaaagacagctgacaccatca
gaaattgaggaattgcaaaagcagcaagataagatggcagaggacagggaaaaggcagac
gcagaaaggaaaaagtggatagaagaagaggtctttgtagcatttgcaagagtatatagt
ggcaggcttaaagctcgacagaaggtttacattttaggaccaaagcacgatcccagtgtt
gtgttggctcagctaggagaaggcaagcaactatctgaagaaaatataggagagttcaaa
cacattcacatctgtgagatagcagatgtgtacttacttctgggccgtgagctagagcaa
atagcatatgcaacttccggtactgtggttggaataactgggctggaggactatgtcatc
aagagtgccacactttctagtacctataccatgccagctttcacagaactcacgctcaac
gtcactcccatattgcgagtcgctgtggagcctcatgatccaagggatttgccaaaactg
cggcgtggtttgaagattcttaaccaagctgatccctgtgtacaggtaaaattacaagac
agtggtgaatatgtcattatcaccgctggagaagtccatctacagcgttgtgtggatgac
ctccaagaacgttatgctggtatccccatacgaacttctgatcccattgtacccttcagg
gaaaccataataccccctccaactgttgatcgactcaatgaggccattgaaggggagaac
attagccagaagaagcctttgaatggtgatcccctgggagtggtggaagtgagtggacat
tatggcaagttacgatgcagagcagtgcctttaccagaacaagtcaccaaactgctggaa
gaatatcaagacctcctgaaatctatctcaaaaataggggctgttgtcaatacttcagat
gctttggaaaagaaggatagtcataccattatagagggatcagacatggtttctgaccaa
ggaaatactatgaaaatgggagcattagttcaggctcttgagaacagagaaaaattaaat
caagaaacctttgctgcaatacaagatttaaagaagaaattggataaggcatttaaggaa
gcaggcaatgaatgggaaaatgccatcaatcagatttggagttttggtcctcagggctgt
gggcccaacatcctgttaaattgtatccagtcatatcctcggccatcaatctgggaaaag
tctacttctgttgactcacctttagctgcctttgacacaaactttgtaactggcttccag
attgcaaccagtgctggcccactctgtgaagaaccaatgatgggtgtatgctttattgta
gaagattggagtataaaacccacagacagtagtaatgaagatgcaggagcaaacagtgta
tcatctggtcagattatttctcttgccaaagacacacttagaaaagcctttgataagcag
tgtcagaggctggtatgtgccatgtactcatgtgtgattagtgtcacttctgaggttatt
ggaaagatgtatagtgtaatagggaaacgacagggacgaattgttgatggtgacatcaca
gagggttcaacttcctggaatgtcactgcttatcttcctgtggttgagagcatgaacttt
gcaaatgagcttcggaaatcgacgtcaggagaagcagttcctcagctggtgttttctcac
tgggaaaccctagacattgaccctttttgggaaccacataccactgaagaactggcccac
tggggtgagaaagctgaccgggagaatttggcccaaaagtacatcaactctgtacgacga
agaaaggggctagctgtggatgagaagatagtggaatttgcagaaaaacaaaggacttta
tcaaaaaataaatag
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integrated database retrieval system