Penaeus chinensis (fleshy prawn): 125024964
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Entry
125024964 CDS
T08118
Name
(RefSeq) nuclear pore complex protein Nup160-like
KO
K14303
nuclear pore complex protein Nup160
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125024964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125024964
03036 Chromosome and associated proteins [BR:
pchn03036
]
125024964
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125024964
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125024964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
HTH_55
ChAPs
Motif
Other DBs
NCBI-GeneID:
125024964
NCBI-ProteinID:
XP_047468722
LinkDB
All DBs
Position
4:complement(6265257..6282665)
Genome browser
AA seq
1406 aa
AA seq
DB search
MAAAATHHLGFREVIPDQSALVHWRNITIDTGAAQSTLQDIKVPEYGGGYAYKSLSPATR
NRYIYWRVCHDVVELWEESLDHDFVHNHVQLRFADTPVLEGLSVHETRQYVYILLATVSS
VHRFRLPHPTSMQATKSKPYSILSELTFQTLKEYHNLHILNSSAVGAGEGLPHTAGTHLL
AGEGGDAVFVLGQTGGTLLVVKMYDLPYSVFTETIKNASLMNRLFTGFVPGMFRGLEGCE
TVTSLVVQEIAGDVVAIGICRDGKVRAWSCSKLQCILAHDTLENTAEAGRKLNPGAQRHQ
IRSYGQGEESIFGVFLNFTEKQLLVVYQPTLNLGQISLSHIKTLYPPQYDLVDFSVTSAY
IWTLWTDANNETQLLYAPVNSGEGCKNPPGLSSVVLEQPPEKDVPLTDPFLDPREIYLRE
LFMPNRFSAHTLRKALGIYRRNMDMSTLIDRGMWKLQEEVEAALRDQVEARLTSDLTEEE
VTQITIEAWATFYSHTLQYHQVGHKPVGVIGVGADHLVGIVRKQVVSWVRPMDALEVVAL
APVESLNVASLDGVLSEDTVVSTAVVALAKPLHLVRQMVPSEVAAAFTLDLYHLQPPDQV
GNSITTSLLADNATMATSLAQQLASVSGLVPGLWAYLHALQLDMGMPDALTLENGSMCVP
ETLSGVLCGHAGAAIVSAVVAQIAKGRLELCRDLLLLQQVALQLGHQCRLTPEASAQLRS
TLLPKTTLLTQAYFALLHVSTTAAIHPSQGTVEVAKRQLAALSLNDGPSGIQMPPSPGRP
ATVLELYFLGSGGDQARSLIAPSVGGASEDTSSNVDGGWAQLLMPLSTTLAQLAWPISRC
LMLVEWLVWGGQHGAVQEYVRLLQPWCEWNSCSRKFLLGVALLNQGEATKAAQLLVAALE
GVVTEDYLGVKVAGGAVDTPADQLRVMYCLRVIRLLEQSGQPALALQVAQEGVAMASCDH
PSMSALYSVIFKHHLELQHHDEAFTALLACPDQHRRRNCLRQLIVSLHERKCLTTLVNYQ
YGSLEADVINILESRARSADILVNNYYDLLYAFHISKHNYKKAASVMYECALRLNIEGVG
EKGLQQQAKCYLACLNCLRHIPPQQAWIIKPLPKSGEDEADQELATRKSNSISPKRSSDG
ESVAPPLSRRRPQVKVLELPHIEREYELVHARLKIVKTQPDASASGGPLSAADTISLLTH
GRLFTEAVRLARLFEQPIAPILQGLAHTCIHPLNTLNKATTQDENGILRESEESQMWWNL
LRELMEGEEQSNQTVLHNAVTSVLLQHSTTLPTWLVNSYMVRNCGELLRLYVGHGLLEEA
VKLACQYIDGVLGHGTEQVGLPNALHAGAAPVWLPYTALDKLLLELREVQQDTHFAKLSA
ELNDRLKKYSQELQCVSQNRIILLQG
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgactcaccacctgggcttcagggaggtcatccccgaccagtccgcc
ctcgtgcactggagaaatattaccatagacacgggagcagcacagagcacccttcaggat
atcaaagtaccagaatatggagggggctatgcctacaaatctctttccccagccacacgc
aacagatacatatattggcgagtgtgtcacgacgtagtggagctatgggaggaaagtctt
gaccatgactttgttcataaccatgttcagctcagatttgcagacactcctgtgctagag
ggtttgagtgtacatgaaactcgccagtatgtttacatccttttggcaacagtgtcctcc
gtccaccgttttcgtttgccacatcctacttcaatgcaggccacaaaaagcaagccatat
tctatcctcagtgagctgacattccagactctaaaggaataccataatttacatatccta
aacagcagtgcagtaggtgcaggcgagggtcttccccacacagcaggcactcacctcctg
gcaggtgagggaggggatgcagtatttgtgctgggacagacaggtggaactctgcttgtt
gtcaagatgtatgacttgccatactctgtgtttacggagaccatcaagaatgcctctctc
atgaacaggcttttcactggttttgtgccagggatgttcagaggattagaaggctgtgaa
acagtgacaagccttgtggttcaggagatagctggtgatgtggtagcaataggaatctgt
cgtgatgggaaagtacgtgcttggtcttgctccaagctacaatgtattctcgcacatgat
actcttgaaaatactgcagaagcaggccgcaagttgaatcctggagctcagcgccaccaa
atacgaagctacggccaaggggaggagagcatctttggcgtattcctgaacttcaccgag
aaacagctccttgtggtgtatcagccaaccctaaatttaggccaaattagcctaagtcac
atcaaaacactttatcctcctcaatatgatctagttgacttcagtgtaacgtcagcctac
atatggacactgtggactgatgcaaataatgagacacagttgctttatgccccagtgaac
agtggagagggatgtaaaaaccccccggggctctcctcagtggtgttggagcagccacca
gagaaagatgtacccctcaccgatcccttcctggacccaagggaaatctacctgagagaa
ttgttcatgccaaataggttttctgcacatacgttgcggaaagcacttggcatataccga
agaaacatggatatgtcaacattgatagatcgtggaatgtggaagctacaagaggaagtg
gaagctgcccttagggaccaagtggaagcaaggttgacatctgaccttactgaagaggag
gtgacacagataaccatagaggcttgggcaacattctactctcatacacttcagtaccat
caggttggccacaagccagttggagtgattggtgtaggggcagaccatctggttggtatt
gtcagaaagcaggttgtatcatgggtacggcccatggatgccctggaggtggttgctttg
gcccctgtggagagtttgaatgtggcaagtctggatggagtgctgagtgaagacactgtg
gtgagcactgctgttgtggctctagcaaagcctttgcacctggtaagacagatggtaccc
tcagaggtagcagctgcatttactctggatttgtatcatcttcagcctccagaccaagtt
ggaaattccattactacttcacttcttgcagataatgctaccatggccaccagcttggct
caacaactagcaagtgtttcaggtttagtaccaggattatgggcatatttgcatgctctt
cagttagacatgggaatgcctgatgccctgacactagaaaatggaagcatgtgtgtgcca
gagacactgtctggtgttctttgtggacatgcaggagctgctatagttagtgctgttgtg
gctcagattgcaaaaggaaggctagaactttgcagggacttgctgctgctccaacaggtg
gcacttcaactaggccaccagtgccgtctgacgccagaagcctcagctcagttacggtca
acattgctcccaaagactacacttctcactcaggcatactttgcattattgcatgtgtca
accacagcagccattcatcccagccaaggaacagtagaagtagctaagcgacagttagcg
gccctatccctaaatgatggtcccagtgggatccaaatgccaccaagtcctggccgtcca
gccactgtccttgaactatacttccttggcagtggaggggaccaagcacgttccctcata
gctccttctgttggaggggcatcagaagacaccagcagtaatgttgatggtggttgggca
cagctcttgatgccattgtcaaccacattagctcagctggcatggcccataagtcgatgc
ctcatgttggtcgaatggctggtatggggtgggcaacatggagctgttcaagagtatgtc
aggcttctccagccgtggtgtgaatggaacagctgttcaagaaagtttttgttgggtgtt
gcactattaaaccaaggagaggctacaaaagctgcacagttgcttgtggcagccttggaa
ggggttgtaacagaagattacttaggtgtgaaagtagcaggtggtgcagtcgatacccct
gcagaccagctacgtgtcatgtactgcttgcgtgtgattcgtttgctggagcagagtgga
cagcctgcacttgctctacaggtggcccaagagggtgttgctatggcctcctgtgaccat
ccatccatgtctgcactttattctgtcatttttaaacatcacctagagttacagcatcat
gatgaagcatttacagccctgttagcctgcccagatcagcatcgcagaagaaactgtctg
cgtcagctcattgtttccctccatgaacgcaaatgcctaaccaccttagtcaactaccag
tatggcagtcttgaggcagatgtaattaacatcctggagagtcgtgctcgatcagctgac
atacttgttaacaattattatgatctcctgtatgccttccacatctctaagcacaattac
aagaaagctgcgagtgtcatgtacgaatgtgctctgcgcctgaatattgagggagttgga
gagaagggactccaacagcaggcgaagtgttatcttgcttgcctcaactgccttcgtcat
attccacctcagcaagcgtggattatcaaaccattgccaaagtcaggagaggacgaagct
gatcaagaattggcaaccagaaagtcaaattctatcagtccaaagagaagcagtgatgga
gagtctgtagcacccccactcagtcgccgccggccacaagtcaaggttttagagttgcca
cacattgagagagagtatgaattagtgcatgccaggctcaagattgttaagacacagcct
gatgcctcagcttcaggtggcccacttagtgcagcagacaccattagtttgctaacccat
ggtaggcttttcactgaggcagttcgacttgcaagactttttgaacaacccattgctccc
atccttcaagggttagcccacacctgtatacatcctctgaatactcttaataaagccacg
acacaagatgagaatggaattttaagggaaagcgaagaatcccagatgtggtggaacctt
ctccgggaattgatggaaggagaggaacagtccaatcaaactgttcttcataatgccgtg
acatctgtgctcctccaacactctaccactttgcccacttggctagtcaactcttacatg
gttcgaaattgtggcgagcttctacggttgtacgttggccacggcctcttagaagaagca
gtaaaacttgcttgccagtacattgatggtgttttaggtcatggaacagaacaggttggt
ttgccaaatgctttgcatgcaggggctgctccagtgtggcttccatatacagcccttgat
aaactgctgttagaactgagggaagtgcagcaggacacacactttgccaagttgtcagca
gagttgaatgatcgcctaaagaagtacagccaggagcttcagtgtgtttcacagaatcgc
attatcttgcttcagggataa
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integrated database retrieval system
