Penaeus chinensis (fleshy prawn): 125025057
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Entry
125025057 CDS
T08118
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125025057
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125025057
NCBI-ProteinID:
XP_047468934
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All DBs
Position
1:18744849..18807926
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AA seq
2175 aa
AA seq
DB search
MKITYLLGLCLLFLFVIVCPGGGDAQRHAQRQGGVVYGRSYVPSTDKRNRGRSRQSSSYS
SSTYSSSSSSSSSRTGPDGVTRLTTSGSSYGSPGSGVQNTSYTYTTFDREDARPSSSPSA
SSSSSTSDRTVLTAGTTSRTSSTSSSKSRSRGGKGRGRGRDRERERERERGEERREGQEG
DDQTPVVDESYFERRGQSQDGQGYFRWNGREYTGVGHPGSSISRRVKTSKTTTTTSQARP
GTSVTYTYTVPGGSSVTTYRNTTTYTSHVPGYSTSEAQGGFDSRYGATDYGATDYGSRGS
TNVDSRYESSYNRRYNYGGSVTGSSGSSSSRGGSGRGSVGFGETYHKNTEEELTFDYEDG
EYDPAFERGPVISLEDRTHPLVVRGFGVAPGYGQRTGHPCDQGSCYPGTGNLLIGREARL
SATSTCGLENRERYCIVSHLKDRKKCFWCDSRPQWDGSPQYSHKIDNIVYRSDPRTRRRS
WWQSENGKEDSSIRLDLEAEFHFTHLIITFRTFRPSAMLIERSFDFGKTWKVYRYFAYDC
NEAFPGIPTGPPSAINDVVCESRYSAVEPSTEGEVIFRVLAPNIEIENPYSEDVQNLLKI
TNLRVNFTKLHTLGDQLLDNRREIKEKYYYAIYEMVVRGSCSCYGHASRCLPLPGVEDRP
DMVHGRCECTHNTKGLNCEECEDFYNDLPWRPAIEKESNACKKCNCNNHATRCHFDPDVY
ETSGRISGGVCDDCAHNTYGRNCEQCIPYYYQDPARDIRDADICQPCNCDTRGSIDDAIC
DSHTDDPAGLLAGRCHCKSNVDGLKCDRCKAGYWNFTTDNPEGCQEIAEDYKNQPRSEWP
QKPCTCHLLGTLNNAGCNVLTGECSCKRFVTGRDCNQCLPQHYGLSEHPDGCQPCDCDRG
GSLDNNCDVLSGQCKCRPHVTGRRCDTPEEGYYVASLNYLTYEAELARGSELYCEEASLY
DFRQSRLSNCQVVMREPYRDGRDTTWTGLGFMRVFEGSYLEFEIENIETSMEYDLVIRYE
PQFQGVWENVMVTIERPEPIDPTGSCGNTRPTDDQMVVNLPGNNRHVTLFPPVCLEAGKR
YKVRIDFRRSNANTDSPSASILVDSIMLIPKAERLPFYSGSGELDDLRYEYERYRCSEGF
YDGQRVENIPEICRDKHLGSIGFYVYGQAFSCQCDGTGSYSSICSSMGGQCDCKPNVVGR
RCDRCAPGTFGFGPEGCKPCDCSPVGALDNFCDQQTGQCKCRPNTYGRQCNECQPGFWNF
PNCQRCECNGHADTCDSYSGICHECRDNTTGPNCALCIEGFYGDPRLEVGIACRPCPCPG
TVDSGHSFADRCALDPRTKDVVCECADGYAGSRCDVCADNYFGNPEVPGGQCESCDCSNN
IDISRPGNCDSRSGECIQCLFNSFGFNCERCRPGFYGDALNQQCRECVCNILGTNQTIEF
CDHETGQCPCLPNVLGLECDRCAANHWKIASGIGCERCACDPVGSYSEQCNEFDGQCQCR
PGFGGRQCNQCQTNFFGNPRVECLPCNCNPEGSETLQCDHETGYCKCREGIGGVKCDECA
RGFTGRAPYCQTCGECFDNWDLILNDLRDRTEALIAAAGQIKQTGATGAYSHEFESMEEK
IADVQNILLTANLTSQNLASLSSLISELTDNLTVAASELQDLEHGVDNTTQRISLATNAL
ADLRLQAEELKNQAGDLKEKATKLQEANVEGALNLTRVAGERSRVAQEKVELTQVIVGES
RRSRRRTENLLLHALDRFNRTQIGNEENLAEMTDVLDEMYRGIPDLNEQVCDRRGDPCDT
YCGGAGCGKCGGLSCNNGLVNTAELALKFADDAKEMLKKKEASVDELLRGIAGAKRQSDI
ASDLALMAYDLAFSSRNLTDSYKARITKLLEEIEEYFSTPGAKPQEIRDLAEEVLSIVIS
LEPEQITDLAEKITLAIETLTNINAIIDATRNDLDLAIQLKERADRAKVKAEGTLGVAER
VVEALTEASAAQDAAEQAIMQASDDIDATQTHLTQIASETSVAQAKANSSLRDVQDLERR
VESVKSQYIINQQHLEDTTAAVSQADLKAQRAANDAKQLEDNYEIVEEKLRIKFQAAEEA
RQRAEELRKRANKLASEAQVKLSMLKEMEVIFVKNEIILEDYEEEIRKMEVSMEEHHEYI
SKKTEFYATCQSGRR
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacatatttactcggattatgtttattattcctgtttgtgatagtatgtcca
gggggaggcgatgctcagcgccacgctcagcgtcaaggcggcgtggtctacggtcgatcc
tacgtcccgtctactgacaaacggaacaggggtcgctctcgccagtcctcctcctattcc
tcttccacttacagttcctcttcctcctcctcctcttcgcgtaccggtcccgacggggtg
acgcgcttgacgacgagtggcagctcgtacggcagccccgggtcgggggtacaaaacaca
tcttacacttacacgaccttcgaccgagaggacgcacgaccttcctcctctccttccgcc
tcctcttcctcctcaacctcggataggaccgttttgactgcgggcactaccagcaggacc
tcctctacctcatcttccaagtcgcgctcacgcggaggcaaaggaagaggcagagggaga
gatagagagagggaaagagaaagagaaagaggagaggagaggcgggaagggcaggagggt
gatgaccagacgcccgtggttgacgagtcctatttcgagcggcgtggccagtcccaagac
ggtcagggctactttcgctggaatgggcgcgagtacacgggcgtgggtcatccgggttcg
tcgatctcgaggcgcgtcaagacctctaagactaccaccaccacgagtcaggcacgacca
ggcacctctgtcacgtacacctacacagttcctggggggtcgagtgtgaccacgtacagg
aacaccaccacgtacacctcccatgtcccaggctactcgacatcggaggcccagggcggc
ttcgactctcgctacggcgccactgactacggcgccactgactacggctcgcggggctcg
accaacgtcgactcgcgctacgagagctcctacaatcgccgctacaactacggcggtagc
gtcaccggcagtagtggcagcagcagcagcaggggcgggagcggcagaggcagcgtcggg
ttcggcgagacctaccacaagaacactgaagaagagctcactttcgactacgaagacggg
gagtacgaccctgccttcgaacggggtccagttatctcgctggaggatcgaactcaccct
ctcgttgtgcgtggattcggagttgctccaggatatgggcagaggacggggcatccatgt
gaccagggctcctgctacccaggcacgggcaacctgctcatcggacgagaagccaggctc
tcggctacgtccacgtgtggcctggaaaatagggagcgctattgcatcgtgtcgcatctg
aaggaccgcaagaagtgcttctggtgcgattctcggcctcagtgggatggcagcccgcag
tattctcacaaaatcgacaatattgtgtatagatcggatccccgcacaagacgaaggtca
tggtggcagagtgagaatgggaaggaggacagcagtatccgccttgacttggaggcagaa
ttccacttcacgcatcttatcattacattcaggaccttccgtccatctgctatgcttatt
gagaggtcctttgattttggtaaaacgtggaaggtttatagatactttgcatatgactgt
aatgaagccttcccaggcattccaactggcccaccttcagcaatcaatgatgttgtttgt
gaatcccgttactcagcagtcgagccatctacagagggagaggttatcttccgagttttg
gcaccaaatattgagattgaaaatccatacagtgaagatgttcaaaatctcttgaagata
acaaacttgcgtgtgaacttcacaaaacttcacacacttggtgatcaattactggacaac
agacgggagattaaggagaaatattactatgccatttatgagatggttgtaagaggttcc
tgttcctgctatggccatgcttcccgctgcttacccctgccaggtgttgaagatcgccct
gatatggtccatggacgctgtgagtgcactcataacacaaagggtttgaactgtgaagaa
tgcgaggacttctacaatgatctgccatggagaccagccattgaaaaggaatccaatgct
tgtaaaaagtgtaactgtaataaccatgccacaagatgccactttgacccagatgtatat
gagacctctggacgcatatcaggaggtgtctgtgatgactgtgcacacaacacttatggc
cgtaactgtgagcagtgtatcccatactattatcaggatcctgccagagacatcagagat
gctgatatttgccaaccctgtaactgcgacacccgcggttcaatagacgatgccatttgc
gactcccacactgatgatcctgctggattgctagctggaagatgtcactgcaagagcaat
gttgatggcctcaagtgtgaccgatgcaaggctggttactggaatttcactactgataat
ccagagggttgtcaagaaattgcagaagattataaaaaccagccaagatcagagtggcct
cagaaaccctgtacctgccatcttctgggaacactcaacaatgctggctgcaatgtcctg
actggagaatgttcctgcaagcgatttgtgactggacgtgattgtaaccagtgtttgccc
cagcactatggcctgtctgagcacccagatggatgccagccttgcgactgtgatcgagga
ggttctctcgataacaactgtgatgtgctcagtggccaatgcaagtgtcggccacatgtc
acgggtcgtcgctgtgacacaccagaggaaggctattacgtcgccagcctgaattacctt
acatacgaagcagaacttgcaaggggatctgagctttattgtgaagaggccagtttatat
gacttcaggcaatccagactaagtaactgccaggtagtgatgagggagccctaccgcgat
ggacgtgacacgacttggacaggtcttggcttcatgcgtgtctttgagggatcctacttg
gagtttgagattgagaacattgaaactagcatggagtacgaccttgttatccgctatgag
ccccagttccaaggtgtttgggagaatgtgatggtaaccattgaacgaccagaacccatt
gaccctacaggttcctgtggaaatactagaccaacagatgaccagatggttgtcaatctt
ccaggcaataatcgtcatgtgacactcttcccacctgtgtgtcttgaggctggcaagaga
tacaaagtccggatagatttcaggcgttccaatgccaacacagattctccatctgcttcc
atacttgtggattctatcatgctgattccaaaggctgagaggctacccttctactctggc
tcaggagaacttgatgacctgcgatatgagtatgagagatatcggtgcagtgagggcttc
tatgatggccagagagttgagaacattccagaaatttgccgagataagcatcttggcagt
attggcttttatgtctatggtcaagcattctcttgtcagtgtgatggcactggcagttac
agcagcatatgtagctctatgggaggtcaatgtgactgcaaaccaaatgtcgttggacgg
cgctgtgatagatgtgcaccaggaacatttggctttggcccagagggttgcaagccttgt
gattgcagtccagttggagccttggacaatttctgtgatcagcagacaggccagtgcaag
tgtcgcccgaacacctatggccgacagtgtaatgagtgccagccaggattttggaacttc
cctaattgtcaacggtgcgagtgtaatggccatgctgacacctgtgactcttacagtgga
atttgccatgagtgccgtgataacaccactggtccaaactgtgccttgtgtattgaaggc
ttttatggagatcctcgtctggaagtgggtattgcctgtcgcccatgtccatgcccaggc
acagtagactctggacatagtttcgctgaccgctgtgcacttgatcctcgtactaaggat
gttgtatgtgaatgtgctgatggatatgctggttcgaggtgtgatgtatgtgcggataac
tattttggaaaccctgaagtgccaggaggtcaatgcgaatcctgtgattgcagtaataac
attgacatttctcgtcctgggaattgcgattcccgcagtggggagtgcatacaatgtctc
ttcaattccttcggcttcaactgtgagcgatgccgcccaggtttctatggggatgcactt
aatcagcagtgcagagaatgtgtctgcaatatccttggcaccaaccagaccattgagttc
tgcgaccatgagactggccaatgcccctgccttcctaatgtgcttggactggaatgtgac
cgctgcgctgcaaaccactggaagattgcatcaggcattggctgtgaacgttgtgcatgt
gaccccgtgggttcctactcagagcagtgtaatgagtttgatgggcagtgtcagtgtcga
cctggatttggtggacggcagtgcaatcagtgccaaacaaatttctttggcaatccacgt
gttgaatgcctgccttgtaattgcaacccagaaggctcagagactctccagtgtgatcac
gagacagggtactgcaagtgtcgagagggcatcgggggcgtgaagtgtgatgagtgtgcc
cgaggattcaccggcagagcaccatactgccagacatgtggggaatgctttgacaactgg
gaccttattttgaatgatttacgagatcgcacagaagccctgattgcagctgctggacag
atcaagcagacaggagcaactggtgcatacagtcatgagtttgagtcaatggaggagaag
attgcagatgtacagaacattttgctaactgccaacctaacatcacagaatcttgcctcc
ctctcaagcctcatttctgagttaactgacaacctaactgtagctgcatcagaacttcaa
gacctggagcatggtgtggataacactacacagcgcatttctttggcaacaaatgccctg
gcagatcttagattgcaagcagaggagctgaagaatcaagcaggagaccttaaagaaaaa
gctactaagttgcaagaagctaatgttgaaggtgctctcaacctcaccagggtggctgga
gaaagatcacgagttgcccaagagaaagttgagctaactcaagtcattgttggggagtca
aggcgctctcgccgcaggactgaaaatcttcttctgcatgccttagatcgtttcaaccgt
acgcagattggaaatgaagagaacttagcagaaatgacagatgtgctggatgaaatgtat
cgaggcattccagatcttaatgagcaggtgtgtgaccgacggggtgatccttgtgatacc
tactgtggtggagctggctgtggaaagtgcggagggctctcgtgtaataacggtcttgta
aacaccgctgagcttgcactcaagtttgcagatgatgccaaggaaatgctgaagaagaag
gaggcctcagttgatgagctattacgaggcattgctggggctaaaaggcagtctgatata
gcctcagacttggctctgatggcctatgacttggccttcagttcccgtaacttaacagat
tcatacaaagcaagaattaccaagcttttggaagaaattgaggagtactttagcacacct
ggtgcaaaaccgcaggaaatcagggatctagctgaagaggtcttgagcatcgttatctcc
ttggaaccagaacagattacagacctggcagagaagatcacacttgccattgagactcta
acaaacattaatgcaattattgatgcaaccaggaatgatctggacctcgcaatacagttg
aaagaaagagctgacagagccaaggttaaggctgaaggaacactaggtgtagcagaacgt
gttgtagaagccctcactgaagcaagcgcagcacaggatgctgcagaacaagctatcatg
caggctagtgatgacattgatgccacacagactcatcttacccagattgctagtgagacc
agtgtagctcaggccaaagctaattcctcactaagggatgtacaggacctagaaaggaga
gttgagagtgtaaagtcgcagtatatcatcaatcagcaacatctagaagatacgactgct
gctgtcagccaggcagatctcaaagcacagcgagcagccaatgatgcaaaacagctggaa
gataattacgagattgtagaggaaaagctacggatcaagttccaagcagctgaagaagcc
agacaaagggcagaagaacttcgaaagagagcaaacaaattggcatcagaagctcaagtc
aagctaagtatgcttaaggagatggaggtaatatttgtgaagaatgagataattcttgaa
gactatgaagaagaaattcgcaaaatggaagtgagcatggaggagcaccatgaatacata
tcaaagaagacagaattctatgctacctgtcagtctgggagacgctga
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