Penaeus chinensis (fleshy prawn): 125025180
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Entry
125025180 CDS
T08118
Name
(RefSeq) dynein intermediate chain 2, ciliary-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125025180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pchn03037
]
125025180
04812 Cytoskeleton proteins [BR:
pchn04812
]
125025180
Cilium and associated proteins [BR:
pchn03037
]
Motile cilia and associated proteins
Dynein arm
125025180
Cytoskeleton proteins [BR:
pchn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125025180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WDR55
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
125025180
NCBI-ProteinID:
XP_047469113
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All DBs
Position
4:6200592..6216144
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AA seq
584 aa
AA seq
DB search
MGIPRASSPPPQPPSGLFPASPAEEGGRSGGGDQTGCLEDSDQRARPVHPQGGEVRASGR
RLLAHRPAHLALQAKSTPAIATENQDFDVHEDLRELYGDLVSAEELARLDAQPNCFNFSE
RVSQTLLPQTKVLPLRSTFAEDEVDLQELLPAAKVVERMVNQNVQDEVVQDYKYWEDASD
EFHPLEGSLLPLWKFTCDASRVCLVTDVCWSFLCDDLFAAGYATEGDWEAEDEGMVCLYT
LKNPGVGERLVPVPRGVTSIHLHPTRPGVLVAGRTDGEVMVVSFRGAGAPRVLTSSAATG
KHLQPVGQVRWEDHDRGEIPTFYSVSTDGRLTHWKVNQSFLQPFDVIDFCEVSLWPPSHD
PTPIRFPERPRQSCEPPPTTGRGAIEGRGTCLALHPFRRDLLLLGTDTGAVFRLHTHNTI
HALTRFSAHAMQVTALMWNRHHKQVFASCGFDWFVKIWDETHPLPLVTHDLGAPVTAVTW
AFHSSSVLAAATEDGRVHVFDFFERKCGPLCVHRVQRRRKVAPACLAFNPFHPLLLVGGE
RGYLMASKLSPNLRKPFREAKEEDERTVAEKELYKMDRLIATSK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggcatccctcgggcctcttccccgcctcctcagcctccctcaggcctcttccccgcc
tccccagcagaggaaggcggccgttccggaggtggagatcaaactgggtgcctcgaggac
tcagaccaaagggcgcgtccagttcatccacaaggcggggaagttcgagcctctgggaga
cgacttctcgctcatcgacctgctcaccttgccctccaggccaaatccacgcccgccatc
gccacggagaaccaagacttcgacgtgcacgaggacctccgcgaactctacggcgacctg
gtctcggccgaggagctggctcgcctcgacgcgcagcccaactgcttcaacttcagcgag
agagtttcccagacgctcctaccgcagaccaaggtgctacctctgaggtcaaccttcgcc
gaggacgaggtcgaccttcaggagcttcttcccgccgccaaggtcgtcgagagaatggtg
aatcagaatgttcaggatgaggtagttcaagactacaagtactgggaagacgcgagtgac
gaatttcaccccctcgaaggctctctactccccctgtggaagttcacctgcgacgcgtcc
agggtgtgcctcgtgacggacgtctgctggagcttcctgtgtgacgatctcttcgcggct
ggatatgcgacggaaggcgactgggaggctgaggacgaggggatggtgtgtctgtataca
ctcaagaatccgggtgtaggggagaggctcgtgcccgtgccccgaggcgtgacttccata
caccttcacccgacgcgtccgggtgtcctggtggcgggtcgcacggacggcgaggtgatg
gtcgtgagcttccggggcgccggggctccgcgcgtcctcacgtcctcggccgcgacgggg
aagcacctgcagcccgtcggccaggtgagatgggaggaccacgacagaggagagatcccg
accttctactccgtgtcaactgacggccgactgactcactggaaagtcaaccagtccttc
cttcagcccttcgacgtgatcgacttctgcgaggtgtccctgtggccgccgtcgcacgac
ccgacgccgattcggttcccggagcgaccccgccagagctgcgagccgccgccgaccacg
ggcaggggcgccattgaaggccgagggacgtgcctcgccctccaccccttcaggagggac
ctgctactccttgggacagacacaggcgccgtcttccgcctccacacccacaacaccatc
cacgcactcacgcgcttctccgcccacgcgatgcaggtgacagcgctcatgtggaatcgg
caccacaagcaggtgttcgcgtcctgcggcttcgactggttcgtcaagatatgggatgag
actcaccctttgcccctcgtgacccatgacctcggcgctcccgtgaccgcggtgacctgg
gcgttccacagcagcagcgtcctagcggcggcgacggaggacggccgcgttcacgtgttc
gacttcttcgagcgcaagtgtgggccgctgtgcgttcacagagtgcagaggaggaggaag
gtcgcccccgcgtgcttggcctttaatccattccatccgttgctgctggtgggcggagag
agaggttacctgatggcttccaaactatctccgaacctgcggaaacctttcagagaagcg
aaggaagaggacgagagaactgtcgccgaaaaggaactctacaagatggacaggctgata
gcgacgagtaaatag
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