Penaeus chinensis (fleshy prawn): 125025646
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Entry
125025646 CDS
T08118
Name
(RefSeq) RNA polymerase II degradation factor 1-like
KO
K24629
ubiquitin-associated protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125025646
Membrane trafficking [BR:
pchn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125025646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_7
UBA
UBAP-1_UBA2
Motif
Other DBs
NCBI-GeneID:
125025646
NCBI-ProteinID:
XP_047469704
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All DBs
Position
5:5755243..5780766
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AA seq
783 aa
AA seq
DB search
MSTDPAAFVAGVPVKISERFRPPRRITIPASCQYQINPDLLTQDYDFAIEKTTLKWVQER
VSRREKEDNERKDRIAEYEKKKAERKAKEEEEKLRKEKEEEERQRILKEEEEKKRKEEEE
RRLEEEEEKKKTEEEEQNQEQSDEAEGENLDENTNTVEPEENGNESPNETPPGMQENANN
DQQQSQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQTNIHQLQPGLVKSGMGTNFYRNDALYNANPSFESDTSMAYPGMLQPTPIPSQKNN
LRSPLKTPADINFAEFEGEGNDPFDSAALKSINDMEELAKVLDSTNMGTGSQSLDRNTVS
KQNSSEDKRTIPTTYPNGQVAYNAYGQYPYYLQQQLHHTVPQPGQNFGQYTGHLGKNSPV
TSAASPVPSYNNSHQYGGGPDRSFQNTYYPQQWNNSYSAGSPNKGAPFGPYDYRLQANNS
VPSTSQGVLSPSNITGTVTAAPTVPVSMSSGLSNSSTIERGTVGKRQDLEDFYTRYYSPN
KSTVTQVQQSGVRSGDSTPSHSSSSGALGSTTGSLRSCRSVPDLSAAEDSEVTSYSSRIP
SVGEGRGFSHTPPPRPSSTGLSGLEDWKPLPDLPSTPESSPAQHSYQPGLSQTTAGSHQY
TPTKTRLPDPFIELTADAQALVQSMAEMGFPRPRVARAVQKLGTDHKKLIEVLLVLQNLQ
DAGEDEYKAERAFYHYMGDLQKTKDHLAAAKQLCDLGFEDERIVDALLKHDNDRDKALEE
LIA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgacccggctgcatttgtggccggcgtccccgtcaagattagtgagagattc
cgcccgccgagaagaattacaatccccgcatcctgtcagtaccagatcaaccctgacctt
ctaacacaagattatgactttgctatagaaaagacaacactgaagtgggttcaggagaga
gtaagtagaagagaaaaagaggataatgaaaggaaggacagaatagctgaatatgagaag
aaaaaggcagaaaggaaggccaaggaggaggaagagaaattgcgcaaagaaaaagaggag
gaggaacgacaaagaatattaaaggaagaggaggagaagaagagaaaagaggaagaggaa
aggagattggaggaggaggaggagaagaagaagacagaagaggaagagcaaaatcaagaa
caatcagatgaagcggaaggggaaaatcttgatgaaaacaccaacactgtagagccagag
gaaaacggtaacgaaagcccaaatgagacaccgccaggcatgcaggagaatgcaaataat
gatcagcaacaatcacaacaacaacagcagcagcaacagcagcagcaacagcagcagcaa
cagcaacagcaacaacagcagcaactccagcagcaacaacagcagcaacaacagcagcaa
cagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcagcagcag
cagcagcagcagcaaacaaatattcaccagctacagccaggtttagtgaagtcaggcatg
ggaaccaacttttaccgaaatgatgcactttacaatgcaaatccctcatttgaatctgat
actagcatggcatatccaggtatgttgcaacctactcctataccttctcagaagaacaat
cttaggtcacctctcaaaactcctgcagatattaactttgcagagtttgaaggtgagggt
aatgatccctttgacagtgctgcactgaaatcaatcaatgacatggaggagctggcaaag
gtccttgattccaccaatatggggactgggtcacagtcattggaccgaaacacagtttca
aaacaaaattcttccgaagataaaagaaccattcctacaacatatcctaatggccaggtg
gcttacaatgcctatggccagtacccatattatttgcagcaacagttgcatcacactgtg
cctcagccagggcaaaattttgggcagtacacaggtcacttaggaaagaattctccggta
acgtctgctgcatcaccggtgccttcttacaataatagtcaccagtatgggggaggacct
gacaggtcattccaaaatacttattacccacagcagtggaacaatagttatagtgctggt
agtcctaataaaggtgctccatttggtccatatgattatcgcctgcaagccaacaatagt
gttccaagcacatcacagggtgtgctaagtccaagtaacattactgggactgtgactgca
gcacccacagtgccagtgtctatgagtagtggtctgtcaaatagctctacaatagaaaga
ggaacagttggcaagaggcaagaccttgaagatttctacactcgatactattctccaaac
aaatcaacagtgactcaggtccagcagtctggtgtcaggtctggggactcgacaccaagc
catagcagtagttctggtgctttagggtcaaccacaggatcgttacggtcctgtcgaagt
gttccagatttgagtgctgctgaggattctgaagtcacatcttacagtagtaggattcca
tcagttggggaaggtcgaggattttcacacacacctccaccacgaccttcaagcacagga
ctcagtgggttggaggactggaagccacttcctgaccttccaagtacgcctgagtcctct
cctgctcagcattcctatcagcctggactctcacagacgacggcaggatcccatcagtac
acgccaacaaagacacgtctcccagatcccttcattgagctgacagctgatgcccaggct
ttagtacagagtatggcagagatgggttttccacgaccaagggttgccagagctgttcag
aaactgggcactgatcataagaagcttattgaggttcttctggtgttgcaaaatctccag
gacgctggagaagatgaatacaaggcagaacgtgctttttaccactatatgggggacttg
caaaaaacgaaagaccatttggcagcagcaaagcagctgtgtgatctaggttttgaggat
gaaagaatagttgatgctctcttaaaacacgataacgacagagacaaggccctggaagag
ctcatagcctag
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