Penaeus chinensis (fleshy prawn): 125025734
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Entry
125025734 CDS
T08118
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125025734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125025734
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125025734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_28
AAA_22
AAA_5
AAA_33
RuvB_N
Rad17
TsaE
RNA_helicase
AAA_14
nSTAND_NTPase5
ABC_tran
NACHT
nSTAND3
AAA_18
Mg_chelatase
TIP49
T2SSE
AAA_7
AAA_29
DUF815
Zeta_toxin
AAA_19
IstB_IS21
AAA_30
ATPase
AAA_17
PduV-EutP
AAA_25
Sigma54_activat
ATP_bind_1
NPHP3_N
NTPase_1
AAA_23
DEAD
Vps4_C
Parvo_NS1
FtsK_SpoIIIE
cobW
Motif
Other DBs
NCBI-GeneID:
125025734
NCBI-ProteinID:
XP_047469856
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All DBs
Position
1:complement(7756200..7769301)
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AA seq
784 aa
AA seq
DB search
MKMKRPYFQEKSLMPRVIKYMEENDSYTVMEMTDYLIKTYREFRGKSRMAFMNSVDKAYQ
WQKQRLKEKQEDSFDEEIEDSDGGGPDIIEVATPKQQAKPLKKKHAKKYPASPSTTSTPK
SVSKMRDNDFFVIDTTGGDISLNGIRTPEVQKSVKVKRKKDKEMDVEGNKRKKRKQLQPE
MPEITFAEMAGLELLKDKICDLLANLRWPGILQPLQKSVLVTGPTGSGKTTFVQALAGTA
EVSLLRITATELIGGVSGESEEKITEVFEQAASLAPCVLLIEKIEVVAPKLMSAKSMEKR
IGAQFSSCLNNLKVKHKDTKLLVLAETSYPENLDLDLRSSFDSEIFMNIPTEPARVRILQ
VMCDRISFEGNFEEIALRTPGYVAGDLKKLVEKSQGLAWKRRKDCLYGKTEGATLMEEVN
SFLKQFGEMCESEAPDSMVTVNMEDFLEALLHIIPALKREGFPTVPDVTWRDIGGLEDIK
KELREKILEPIKYAKLHEEFGASRPNGILMWGPPGCGKTLLAKAVANEAGINLLPVMGPE
LLNMYQGESERAVREVFTRARNVAPCVIFFDEFDSLCPVRSKGAESGSKTTIVNTLLTEM
NGFSKREDVYVIAATNRPDILDPAVTRPGRFDTLLYVDVPDHEGRVSIFQARTKNGTCPR
CAPDVDFAEISLLCNNFSGADCDQLVYLASKEAIREVIHGSQDISSADSGDKEPKTRLVA
KRHFSAALKKIKPSIKPEEQKRYKKLNLKMGTAPLQESVGGTNQDTSFIDVDKESQPMDI
GDKE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaacgcccatattttcaagagaaatcattaatgccgagagttattaagtat
atggaagaaaatgacagttacactgtcatggagatgactgactacttgataaaaacatac
cgggaatttagaggaaaaagcagaatggctttcatgaatagtgtggacaaagcttatcag
tggcagaaacaacgactgaaagagaaacaagaagacagctttgatgaagagatagaggat
agtgatggtggaggccctgacatcattgaggttgcaacaccaaagcagcaagcaaaacct
ttaaaaaaaaagcatgccaagaaatacccagcatcaccctcaacaacaagtactcccaaa
tccgtatcaaaaatgagagataatgacttctttgtcattgacacaacaggtggtgatatt
tctctaaatggcatcagaaccccagaggtgcagaaaagtgtcaaggtgaaaaggaaaaag
gataaagagatggatgtagaaggaaataaaagaaaaaaaagaaaacagttgcagccagaa
atgccagaaatcacatttgcggagatggctggcctagaattgctgaaagataaaatttgc
gacttgcttgcaaatctccgatggcctgggattttacagcctctccagaagtcagtgctc
gtcactggcccaacaggaagtgggaaaactacctttgtccaggcactggctgggactgct
gaggtttcactattacgcatcacagcaactgaattgattggtggggtctcaggagagagc
gaggagaagatcacagaggtgtttgagcaagcagcctcactcgcaccttgtgtgcttttg
atagagaaaattgaagttgttgctccaaagttgatgtccgcaaagagcatggagaaaaga
attggggcccagttttcttcatgtctcaacaatctcaaagtcaagcacaaagatacaaaa
ctgttggtgctagctgaaacaagttatccggaaaacctggacttggatctccgtagtagt
tttgactctgagatatttatgaacattccaacagagccagcccgagtgagaatattgcag
gtgatgtgtgatagaatatcttttgaagggaactttgaagaaatagccctaagaactcca
ggctatgttgctggagatctaaagaagctggtagagaagtctcagggattagcatggaag
aggagaaaagattgcctttatggaaagacagaaggtgcaaccttaatggaagaagtgaat
agtttcctcaaacagtttggagaaatgtgtgaatcagaggctccagattccatggtaaca
gtcaatatggaagactttttggaagcactattgcatataatcccagcattgaaaagagaa
ggatttcctactgtaccagatgtcacgtggcgagatattggaggattggaagatataaaa
aaggaattaagggaaaagattttggaacctatcaaatatgcaaagcttcatgaggagttt
ggtgcaagtcgacccaatggaatactgatgtggggtcctccaggatgtggtaaaaccctt
ctagccaaagcagtggctaatgaagcaggaatcaaccttttgccagtgatgggtccggaa
ctcctcaatatgtatcaaggtgagagtgaaagggcagtgcgagaggtcttcacacgggca
cgcaacgtagctccttgtgtgattttctttgatgaatttgactctctgtgccctgtcaga
agcaaaggagctgagagtggaagtaaaacaacaatcgtaaatacactgctgacagagatg
aatggcttctcaaaaagagaagacgtctacgttattgcagcaacaaacagaccagacatc
ctggaccctgctgtgactcgaccagggagatttgataccctgctctatgtggatgtccct
gatcatgagggaagggtgtccatctttcaggcaagaactaagaatggtacttgtcctcgg
tgtgccccagatgttgactttgcagaaatttctctcctgtgtaacaatttctcaggagct
gattgtgaccagctggtgtatctagctagcaaagaggccatcagggaagttattcatggc
tcccaagacatctcttctgcagacagtggtgataaagagcccaagacacgtttggttgca
aagcgtcatttctctgctgccttaaagaagatcaagccatccatcaaacctgaggaacaa
aagcgttacaagaaacttaatctgaagatgggaacagctcctctacaagagtctgtagga
ggaaccaatcaagatacaagttttattgatgtagataaagagtctcagccaatggatata
ggagataaagagtga
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