Penaeus chinensis (fleshy prawn): 125025735
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Entry
125025735 CDS
T08118
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03440
Homologous recombination
pchn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125025735
03450 Non-homologous end-joining
125025735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125025735
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125025735
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125025735
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125025735
BRCA1-C complex
125025735
NHEJ (non-homologous end-joining)
MRX complex
125025735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
GAS
SbcC_Walker_B
AAA_15
AAA_21
SMC_N
AAA_29
ABC_tran
Zf_2nd_IFT121
AAA_13
Motif
Other DBs
NCBI-GeneID:
125025735
NCBI-ProteinID:
XP_047469872
LinkDB
All DBs
Position
1:complement(18866131..18894635)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSKLEKMQIMGIRSFGPEEPRKIQFFSPLTLILGQNGCGKTTIIESLKYITTGDAPPGCG
KGASFVHDPKLAKEVTVRGQIKLMLKDTKGATLVTTRSLEATQKLKKIECKTIDATLQRR
RPDGSTDAISSKCADFEAEISNALGVSKPILNNVIFCHQEESNWPLDEGKKVKEKFDAIF
NATKYIKCLDTIRKLRAEMKTKVKNMHEVIDGLKKWRDEANRKRLDLKASCEQQNKIKVQ
KSKLKEELEPIRERLKEICDLEENVGRLNGDLIGEKHKLEALRQSQADLRATLSEQLDCS
DEELYRMIQDFQRNLENMEEEQEKVMSRMQSIQREKEKNQAEVSRTERLRGEYEAAYKTH
QDDIKQRNRRMSSITKEFSFAEFMGVEDFSEQQAQSLLSKLLKVVEEERKKIAEKKEEYE
RKEQAVQKEIDGLRSSEAALDHDIKTKGKQLDETGKKIRQLKQTLMRNESDLSDMDLDSL
KVELTQVEDMIAKEESKVNVTELTAEIETAKKNKREGEHEVDEIKRVVAKMNRQANARSQ
YDIHMKEKKELENKIEFLKRKHADEFEHLLDAIPDDNIKNKVDACADSLRRRVTELRQEI
EGLNKRRTQLSMSIKGQKQQQSRKEQEIRELESKIDNICDGMNLDEALEKSKEVKDNLTR
ERGDLSSSITVLNRFTAKLRQRDCCPLCHRDFPSKDEVNQLIEELEGKVISIPGKLEEVK
VKLDKQEKVHDQIIQLKPQRNLANSAKVELDKIRAQIEEEMKELAKVDSELESQKEMLEM
TQGDEEMARQIQPDVITIENNLRKVKQLKIQIDDLQATLGTSDGGMSMEEAMTRQSELED
KLRKLQAKVEELQEQLQEHKDRLQGLKDRKLRLSTQELELKTKLQETEKLKEDISKLDEE
RNKLTEDIEKAQVDIAPFKFQITTKTSEKTKLMEEKDSWIDTQNNKVSTILETHRRANDL
HRNISAYISRKEENRLKEIREKVSTLQEAASCLEAQKKTVDEQNRNIEKQLANQKQRKRN
LDDEKKIREKETEAKRAQKAIRNLEERIRGFDYDKLIDEKTELLQKSSRIDNQGGILDGR
LQEVNKSIQTLESELRRKEIRDAEKNYKQKFVEMKCTDVAADDLNKYYTVLDTAIMQFHS
DRMRTINSIIRELWRSTYRGNDIDYIEIQTDEAESQGADKRRTYNYRVVMVKNGTDMDMR
GRCSAGQKVLASLIIRMALAETFSTNCGILALDEPTTNLDRENIEALAFALLEIVNKRGN
QENLQLIIITHDQEFLEKLGHPDYTDYFSLVERNDR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttggagaaaatgcaaattatgggcattcggagctttggcccggaggaaccc
cggaaaattcagtttttttcacccctgacactcatcttaggtcaaaatggttgtggaaaa
acaactataattgagtcactgaaatacatcacaacaggtgatgctcctccaggctgtgga
aaaggagcatcttttgtccacgatccaaagttagcaaaggaagttactgtgcgtggtcag
atcaaattaatgctaaaagacacaaaaggagcaactcttgtaacaacacgctccttggaa
gccacacagaagctgaagaagattgagtgtaagaccatagatgcaacattgcaaagaagg
aggccagatggcagtacagatgctatatctagtaagtgtgctgactttgaagcagaaata
tcaaatgccttgggtgtttcaaaacctatcctgaacaatgttatattttgtcaccaggag
gaatcaaattggcctctagatgaaggtaagaaagtgaaagaaaaatttgatgccatattc
aatgccaccaaatacatcaaatgtcttgatacgatacgtaagctacgtgcagaaatgaaa
actaaggtgaagaacatgcacgaagtcattgatggcctcaagaagtggcgagatgaggca
aaccgaaagcgtcttgacttgaaggcatcttgtgagcagcagaataagattaaagttcaa
aagagtaaactgaaggaagaactggagccaattcgagaacgtctgaaggaaatctgtgac
ttggaagagaatgttggccgtttgaatggagacctgattggagagaagcataaacttgaa
gccctaagacagagccaggcagacttgcgggcgaccctttcggagcaactggactgttca
gatgaggaactgtaccgtatgatacaagattttcagaggaacttagagaacatggaagag
gaacaggaaaaggtaatgtctcggatgcaaagcattcagagagagaaggagaagaatcaa
gctgaggtgtctaggacagaaagacttagaggggaatatgaggcagcttacaaaacacat
caggatgacatcaagcaacgaaacagacggatgtcaagcattaccaaggaattttccttt
gcagaatttatgggtgttgaagacttcagtgaacaacaagctcagtctcttttgtccaaa
ctcctcaaagttgttgaagaggaacgcaagaagattgcagagaagaaagaggagtatgaa
agaaaagaacaagctgtacagaaggagattgatggattaagatcctctgaagctgccctg
gaccatgacattaagaccaaaggaaagcagctagatgaaacaggcaagaagatccgccag
ctcaagcagacgttaatgcgtaatgagagtgatttatcagacatggatttagactcacta
aaggtggagctcacccaggtagaagatatgattgctaaggaagaatcaaaagtcaatgtg
actgagcttactgcagagatagaaacggctaaaaagaacaaacgagaaggagagcatgaa
gttgatgaaatcaaaagggtagtggcaaagatgaaccgccaggctaatgctcgatctcag
tatgatatccatatgaaggaaaagaaggagttagaaaataaaattgaatttttgaagcgc
aagcatgctgatgaatttgagcatctcttagatgctattcctgatgacaacattaagaat
aaagttgatgcttgtgcagatagtcttagaaggcgtgttactgaacttcgacaagaaatt
gaaggactaaataagcgtagaacccaattgtccatgagcataaaaggacaaaaacaacag
cagagtcgtaaagaacaggaaatcagagaactggagagtaaaatagacaacatttgtgat
ggtatgaatctagatgaggcccttgaaaagtcaaaggaagtgaaggacaatcttacacgt
gaacgaggagatctctcaagttccatcactgtcttaaatcgtttcactgccaagctccgt
cagagagattgctgtcctctctgtcacagagacttcccatcaaaagatgaagtcaatcaa
cttattgaggagcttgaaggaaaggtgattagcattccaggtaaattagaagaggtcaaa
gtaaaactggataaacaagagaaggtccatgaccaaataatacagcttaaaccccagaga
aacctggcaaacagtgccaaggtggaattagacaagatcagagcccagattgaagaggag
atgaaggagttggctaaagtagattcagaactggaatcccaaaaagaaatgctggaaatg
acacagggagatgaggagatggctcgacagatccagccagatgtgatcacaattgaaaat
aatctgaggaaggttaaacagctcaagattcaaattgatgatctccaggcaactttggga
acctcagatggaggaatgagcatggaagaggcaatgactcgacagagtgaactggaagat
aaacttcgcaagttgcaggccaaagttgaagagctgcaagaacagcttcaggaacacaag
gatcgtcttcaaggtcttaaagaccgcaaattgagactttccacccaagaacttgagttg
aagaccaagcttcaggaaacagagaaactgaaggaagacatttctaaactagatgaggaa
cgcaacaagctcacagaggacatagaaaaggctcaagtggatatagcaccctttaagttc
cagataacaaccaaaacttctgagaagacgaagctcatggaagaaaaagactcttggatt
gacacccaaaataataaggtgagcacaatcctcgagacacacaggagggcaaatgattta
cacaggaatatcagtgcttacatttcaagaaaggaagaaaaccggctgaaggaaattcgt
gagaaggtttctactctccaggaggctgcctcatgcctagaggcacaaaagaagacagtt
gatgaacaaaaccgtaacattgagaagcagcttgccaatcagaagcaaaggaaacgtaat
ctggatgatgaaaagaaaatccgtgagaaggagacagaagcaaagcgagctcagaaagca
attagaaatttggaggaacgtataaggggtttcgactatgacaagctcatagatgaaaag
acagaactcctgcagaagtctagtagaatagacaatcaaggaggcattctggatggacgt
ctgcaagaagtcaacaaaagcattcagacactggaaagtgagctgagaagaaaggaaatc
cgagatgccgaaaaaaattataagcagaagtttgtggaaatgaagtgcactgatgtagct
gcagatgatctaaacaaatactacacagttttagatactgccataatgcagttccactct
gataggatgcgcacaatcaacagtattatccgagaactttggcgttcaacatataggggc
aatgacattgactacattgagatccagacagatgaggcagagtctcaaggtgcagacaag
cgacgcacgtacaattacagagttgtgatggtaaagaatggcacagatatggacatgcga
ggacgttgttctgctggtcagaaagttttagcttcacttatcatcaggatggcacttgca
gaaacattcagtactaattgtggcatcttggcccttgatgaaccaaccacaaacttggat
cgtgaaaatattgaggctcttgcctttgctttgttagaaattgtgaataagaggggaaac
caagaaaatctgcagttgattatcattacacacgaccaagaattcctggagaagcttggc
catcctgattacactgattatttctccttagttgaaaggaatgacaggtag
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integrated database retrieval system
