KEGG   Penaeus chinensis (fleshy prawn): 125026180
Entry
125026180         CDS       T08118                                 
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125026180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchn03019]
    125026180
Messenger RNA biogenesis [BR:pchn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     125026180
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 125026180
NCBI-ProteinID: XP_047470420
LinkDB
Position
6:complement(38644805..38653395)
AA seq 423 aa
MADVQDEDQWLYGDEKDESKEDGEINERTGEEAERSGQENDQDKETPMEEGGGKDSEEKD
GEDKDGDKDKEGDKEDGEKGDDDDSSDDDDLTVTIGTIKTQPDIIQAAPHGARFQPKAAP
TTGLKDDDFTSPGKVNGVPVTEFNLDDLEDKPWRKPGADISDYFNYGFNEETWFKYCERQ
KRMRIQESGAGLTGLGISVTKPFGNTPSSIPVAIVNDNSKYGGSGSQRPKAGPPPRNKGM
GQIDVIGGASNPKTSTIQVMTADRREYSNKVMMNGPPPPIPPSQPGYNDMEFGGNPYGDT
YYGNEGNNFYGGGSYDNPSGWGSGGQPPMGGQGNWEGQGGGGGAPPNVLPVSGGGGYFDE
DSVGAPPPSAEPEEERHRPRRSHRSRSRSPSRHRHSSRHPRSRSRSPSHRHKRKKSKRER
DAD
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggccgacgtgcaggacgaggaccagtggctctacggcgacgaaaaggacgagtccaaa
gaggacggcgagataaacgagagaacgggggaggaggctgagagatcggggcaggaaaat
gatcaagataaggaaaccccaatggaagagggaggagggaaggatagtgaagagaaagat
ggagaagacaaagatggcgataaagataaagaaggtgacaaggaagatggtgagaaagga
gatgatgatgacagcagtgatgatgatgacctgacagtgaccattggcacgatcaagacc
cagccagacattattcaggcggctccgcatggcgcaaggttccagcctaaggctgctcca
accacaggtctgaaggatgacgatttcacatcgccaggaaaagtgaatggcgttccagtg
acagagtttaatcttgacgacttggaagataaaccttggagaaagcctggtgctgacatc
tcggattacttcaactacggtttcaatgaagagacgtggttcaaatactgcgaaagacag
aagagaatgcggatccaggaatcgggtgctggcttgacaggtcttggcatcagtgtgact
aagccttttggtaacactcccagcagtatcccagtagccattgtaaatgataacagcaaa
tatggaggttcgggctcccagcggccaaaagcaggcccacctccacgcaacaagggcatg
ggccagattgacgtcattgggggtgcttcaaaccctaagaccagcacgatacaggtcatg
acggctgatagacgagaatactctaacaaggtaatgatgaatgggccgcctccgccaata
cctccgtcacaaccaggatacaacgatatggaatttggagggaacccatacggcgacacc
tactacggcaatgagggcaacaacttctacggagggggctcctatgacaacccctctgga
tggggctcaggggggcagcctcccatgggtggccagggcaactgggagggccaaggggga
ggaggaggagcaccgccaaatgtgctgccagtgtcgggcggcggagggtacttcgatgag
gactctgtgggggcgcctcccccatctgcagaaccggaggaggagagacaccgaccccga
agaagtcacagatcacgcagccgttccccaagtcgacacagacactcgagcagacaccct
agatcacgttccagatcaccttcccatcgacacaagagaaagaagtcgaagagagaacgc
gatgctgattag

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