Penaeus chinensis (fleshy prawn): 125026360
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Entry
125026360 CDS
T08118
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125026360
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125026360
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GFIT
Motif
Pfam:
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
125026360
NCBI-ProteinID:
XP_047470716
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All DBs
Position
6:3213873..3239349
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AA seq
721 aa
AA seq
DB search
MPKVKTGRIHGSYFPDYELRRRETGLGKTLGWDSGIRRSLYSSMIPSTFWDPIEHDPKTG
FTGHGGVFNLEFSPDGTYLVAACEQRAIMVFDPLSRRQIHYIPLAHENCVNGIKFLDSRV
FASCSDDHTVALWDVRNLKRRIRLLQGHSNWVKNIEYSAGDGILVTSGFDGKILGWDING
YTEDGLLSTELFSMQGLMRMRLSPDCSKLVMCTTGGYMVLVHNLSLEHLSEDLRNFKPNM
YRLMQLSNTPLPHATMFTNLFYRQRNRVEFISDFPPSNEAEVIHSLQVHPQGWCVLSRNT
SMEDSSEWSCVHDIQDLGVTACKDEDEDQDHHGDIEPYDDIPSTSETEAQNSSTFQNRPS
SVNSSNNNSNSSTNSGSESGNVNGNLHLSLTFSPRVEIMLRHSPRDESDDGGGDGGGGGG
GELAGGAGPARSGSSGSNVNAFATASGGSGVRVVDGAGIAVGGSAGGGGGGGGGIDIQLR
FTSMDVFEALEHIRERREEQRIRQGRQRAARTDSEASSSSGNNENSSGFPQSSSSQSPSP
ALQHLGRNRTFSVHRGRDFDNARENLGSGRTAANIIDSRNAFYIRTGTGNHRALLLLRPL
ENYPRYNQTVDPNHKIAKNISRLTHYIEEPNVGRGFIKELCFNSDGRLICSPYAHGVRLM
MFDQNCSELSTCVQDIPQTLYAVSTNNCHKNCVVSTKFSPTHCLLVSGCLNGKIVWHQPV
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggtgaagacaggaaggatccacgggagttactttcccgactatgagctcagg
cggagggagacgggcctgggcaagaccctaggctgggactcgggcatcaggaggtccttg
tactcgtccatgatccccagcaccttctgggatcccatcgagcacgaccccaagacagga
ttcacaggccatggcggcgtcttcaacctcgagttctctccggacgggacctatctggtg
gcagcatgtgaacagcgagccatcatggtgtttgatccactgtccagacgacagatccat
tatatacccttagctcacgagaattgtgtcaatggtatcaagttccttgactctcgcgtg
tttgcatcgtgtagcgacgatcacacagtagccctttgggatgtgcgaaaccttaagagg
cgcatccgactactccagggacacagcaattgggtgaaaaacatagaatattctgctggt
gatggcattttggtcacatctggttttgatggcaagatactaggctgggatattaatggg
tacacagaggatggcctgctgtccaccgagttgttcagcatgcaaggactcatgagaatg
cgtctaagtcccgattgcagcaagttggtcatgtgcaccactggcggctacatggtactc
gtgcacaacctcagtctggagcacctatcagaagatcttaggaactttaagcccaacatg
taccgattgatgcagttgtcgaacactccgttaccccacgccaccatgttcacaaacctg
ttctacagacagcggaacagagtggagttcatctcagacttccctccctctaatgaggct
gaggtcatccactctctgcaagttcatccacagggttggtgtgtgttgtccagaaatact
tccatggaagattcatcagagtggagctgtgttcatgacatccaggacctaggagtgaca
gcttgcaaggatgaggatgaggatcaagaccaccatggagacatagaaccctatgatgac
attccctcaacaagtgagacagaggcacagaattcttcaacatttcagaatagacccagc
agtgtaaacagtagtaataacaatagtaacagcagtacgaacagtggaagtgaaagtggc
aatgtaaatggaaacttacacttatcattgacgttcagcccaagggtggaaatcatgctg
cggcacagcccaagggatgagagtgatgatggtggtggtgatggaggtggaggtggtggg
ggagaattggcaggtggagctggtcctgccaggagtggcagcagtggtagtaacgtcaat
gcctttgctacagcctctggtgggagtggagtgagagttgtagatggtgcaggaatagca
gttggtggtagtgcaggaggaggaggtggaggagggggaggcatagacatccagctacga
tttacatcaatggatgtctttgaagccttagaacacataagggagcgccgtgaggaacaa
cggatacggcaaggaaggcagagagcagctcggactgattcagaggcctcctcgagtagt
ggaaacaatgaaaactcctctggtttcccccagtcctcttcctctcagtcaccatcacca
gccttacaacaccttggccgaaataggacctttagtgtgcacagaggtagagattttgac
aatgccagagaaaatttgggctcagggaggactgcagccaatattatcgactctcgtaat
gcattttatatcagaactggtactggcaatcatagggctctgttgcttcttcgacccttg
gagaattatccacggtataatcagacagtggatccaaaccataagattgcaaagaatatt
tcacggctaactcattacatagaggaaccaaatgttggaagagggtttatcaaggagctg
tgcttcaactcggatgggcggctgatatgttccccatatgctcatggggtgcggctcatg
atgtttgaccagaactgttcagaactttccacatgtgtgcaagatattccccaaaccctg
tatgctgtatccaccaacaattgtcataaaaactgtgttgttagtaccaagttttctccc
acacattgccttctagtctcaggctgcctgaatggcaaaattgtgtggcatcagcctgtt
ctctag
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