Penaeus chinensis (fleshy prawn): 125026415
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Entry
125026415 CDS
T08118
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125026415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125026415
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125026415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125026415
NCBI-ProteinID:
XP_047470815
LinkDB
All DBs
Position
1:complement(19382033..19390555)
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AA seq
281 aa
AA seq
DB search
MAGTDRWRIPGPEKSFPYSLVQPKEDAAFLREDNMRRDGRSAVDHRQLFMSLGIISQAKG
SSYVELGNTKVCCGVYGPKDVQRGNDFKMSCQVICEVKMAPFSCPVRKPPQPDRQQKEMS
RQLKEALETVIILDKFPKSQIDVYVTVIEDDGGLLAACITAAGLALCHASIDVYDMIVGS
SVLWHSGILYVDPSRQEEEFEGSETRSSGREGGHLTIGMMPNYANGQIALTLQEGQMAVD
NICEGLEIAVDTCQRIYTLSRKTLMDHVQSVLDEDDEAATS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcactgaccggtggcgtattccaggaccagagaagagttttccatattcctta
gtgcagccaaaggaagatgcagcctttttaagagaggataatatgcgcagagatggacgt
tcagcagttgatcacagacagttgtttatgagtcttggtattattagccaggccaaagga
tcctcatacgtggaattgggaaacacaaaagtttgctgtggagtatatgggcctaaggat
gtccagagaggaaatgacttcaaaatgtcatgtcaggtcatatgtgaggtgaaaatggcc
ccattttcttgtccagtcagaaaacctccacagccagacagacagcagaaagaaatgagc
aggcagttgaaagaggcattggaaactgttattattttggacaagttccccaaatcccag
atagatgtgtatgttactgtaatagaggatgatggtggacttttggcggcttgtattaca
gcagcaggccttgccttatgccatgcaagcattgatgtctatgatatgattgtaggatca
tcagtgctctggcactctggcatcttatatgtggacccgtcccggcaggaggaggaattt
gaagggagtgaaactcgtagttctggtagagaagggggacacttaactattggaatgatg
ccaaattatgcaaatggacagatagcacttacactgcaagagggccagatggcagttgat
aacatctgtgagggacttgagatagctgttgacacatgccagaggatttatacactgtcc
agaaagacattgatggatcatgttcaatcagttcttgatgaagatgatgaagcagcaaca
tcatag
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