Penaeus chinensis (fleshy prawn): 125026676
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Entry
125026676 CDS
T08118
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125026676
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pchn00535
]
125026676
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125026676
Meiosis-specific proteins
Cohesin complex and associated proteins
125026676
Proteoglycans [BR:
pchn00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125026676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
Fez1
AAA_29
RIC3
Motif
Other DBs
NCBI-GeneID:
125026676
NCBI-ProteinID:
XP_047471238
LinkDB
All DBs
Position
6:complement(2632084..2651853)
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AA seq
1200 aa
AA seq
DB search
MYIRQIIIQGFKSYREQTVIDPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRAEQ
RQALLHEGTGPRVISAFVEIIFDNQDGRIPIDKNEVCLRRVIGAKKDQYFLNRKAVTKLD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGTRVYDERREESKEILR
ETESKREKIEEFLRTIEDRLKTLEEEKEELKEYQKYDKMRRALEYTIHDRELKETRKKLD
DMENQRKNSGAEQEKLRQQLQKAQDAIKTSSKEMKDIKQKLGQVKEERDTYNMEQQQLLK
EKTKLEFTIKDLADEVQGDNKSKERAEKELQKLRSTISQKEAELEAIRPQYEEMKAREDE
AQRELSLKDQKRKELYAKQGRGSQFTSKEQRDQWIQKELRSLNKAVKSKQDQIQRLEDEI
SRDSERRVQLDKKVEELSADTEDYRQSIDEHNKVFYEMKKRKDQLQSERNEHWRKENNLQ
QNVSTLKEELSRADQSLRSMAGKPILNGRDSVQKVLDTFRERGGHLGEIATQYYGLLIEN
FECERSIYTAVEVTAGNKLFHHIVESDKIGTQILKEMNKQKLPGEVTFMPLNRLTVKDID
YPQTNDAIPMVSKLTYSDRYLKALKYIFGRTLICRNLEVATHLARSTRLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEIQKARSELRDQITSAETELRTLQDTLRNTEQEINKIVSEMQK
TEIKNSKAKNLFEKVKTDIRLMKEELSGLERTKQPKERSLSQLKANLEAMMATKEGLESE
LHQDLMATLSVQDQREVDQLNDDIRRLTQENKEAFTRRMKLEADKNKLENLLTNNLHRRK
DELVQALQEISVEDRKRQLEHSQSEIQRVDTRIEEVAVQFKEVEKKVGEHQKKEKSLKAE
LEKLKLKEKEVMERMEEDAKDLEKMASKQNLLHQKIDECTKKIRDLGSLPSDAFDKYQNL
ATKQLFKKLETANTELKKYSHVNKKALDQFISFSEQKEKLVSRKEELDRGYDKIKELMSV
LEHRKYEAIQFTFKQVSKYFSEVFKKLAPQGHAQLVMKSDQDEESEQEEQGTVDNFTGVG
IRVSFTGRNAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAV
ADMIHELSKDAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAYDFVEDDQTHG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcagacagattattattcaaggttttaagagctacagggagcagacggttatt
gatccatttgacccacggcacaatgtagtcgttgggcgaaatggatcgggaaagagtaat
ttcttctatgctattcagtttgtgttgagcgatgagttctcacatctgcgggcagagcag
cgccaggccctcctccacgagggtactggccctcgcgtcatctctgcttttgtggagata
atcttcgacaatcaggatggcagaatacccattgacaagaatgaggtatgcctccgccgt
gtcatcggggcaaagaaggatcagtacttccttaacaggaaggctgtcacgaagcttgat
gtcatgaacctcctggagtcagctggtttctctcgctctaatccctactacatcgtcaaa
cagggtaaaatcaaccaaatggcaacagcacctgattcgcacagattgaaactcttgaga
gaggttgccggaacacgtgtgtatgatgagagaagagaagaatccaaagaaattttaaga
gaaactgaaagtaagagagaaaagattgaagaattcttaagaactattgaagatagatta
aagaccctagaggaggaaaaggaagagctgaaggagtaccagaagtatgacaagatgcga
agggccctcgagtacaccatacacgacagggagctaaaggagaccagaaaaaagttggat
gatatggagaaccaacggaaaaactccggtgcagaacaagagaagttaagacagcagtta
cagaaagctcaagatgccatcaaaacctcttccaaagaaatgaaagatatcaaacaaaag
ctaggacaagtcaaggaggagagagacacctacaatatggaacagcagcagttgttgaaa
gaaaagactaaattggaatttacaataaaagatttagcagatgaagtacaaggtgataac
aagtccaaagaaagagcagagaaagagttacaaaaactgcgctcaactatatctcaaaag
gaagctgaactagaagccatcagacctcagtatgaagaaatgaaagctagggaagatgag
gcacagcgagagttatccttgaaagaccagaaacgcaaagaactgtatgccaagcaaggt
agagggagccagttcacatcaaaggagcagcgtgatcagtggatccaaaaggaattaagg
tctctcaacaaggccgtgaagtctaagcaggaccaaattcaacggctggaagatgaaatt
tcgcgtgattctgaacggagagtacagcttgataagaaagtcgaggaactctctgcagac
acagaggactaccgacagagtattgatgagcacaacaaagtcttttatgagatgaagaag
agaaaagaccagttacagagtgagagaaacgagcattggcgcaaggagaacaatcttcag
cagaatgtgagcactctgaaggaggaactgtcaagagcagaccagtcgcttcgatctatg
gctggcaagcccattttaaatgggcgagacagtgtgcaaaaggtgctagacacttttcgg
gaacgtggaggccatcttggagagattgccacacagtattatggtcttctgatcgagaac
tttgagtgcgagaggtccatttacacagccgtagaggtcacagctggcaacaaattgttc
catcacattgtggagtcggataagattggcacacaaatcttaaaggagatgaataaacaa
aagctacctggagaagtgacattcatgcctcttaacagattgacagtcaaggatattgat
tatccacaaacaaatgatgccattcccatggtgagcaagcttacttattcagaccggtac
ctcaaagcgctgaagtacatcttcggacgcaccctcatctgccgtaatcttgaggtggcc
acacatcttgcccgctcaactcgactggattgtgtgacacttgatggtgatcaggtatcc
agcaagggttccttgactggtggctacttcaacacctcaagatcacgcctggaaatccag
aaggcgagatctgagttgagggaccagatcacctcggcagaaacagagctcaggacacta
caagacaccctgagaaacacagagcaggaaatcaacaagatagtgtctgaaatgcagaag
acggagatcaagaacagcaaagcaaagaacctctttgagaaagtgaaaacagacattcgt
ctaatgaaagaagagttgtctggcttagagcgcacaaagcaacccaaagagcggtctcta
tctcagctgaaggccaacttggaagccatgatggccacaaaggagggcctggaatcagag
cttcaccaggatctcatggccacccttagtgtccaggaccaacgtgaagtcgatcagttg
aatgatgacatcagaagattgactcaggagaacaaagaggcctttacacggcgcatgaag
cttgaggctgacaagaacaagctggagaacttgttgacaaataacctccacagaagaaaa
gatgaacttgtacaggccctccaagaaatctcagtagaggaccgcaaacgtcagctagag
catagtcaaagtgagatccagagagtggatacacgtatcgaggaagtagctgtccagttc
aaggaagtggagaagaaagtaggagaacatcagaaaaaggaaaagagtttaaaagctgag
ctggaaaaactgaaattaaaagaaaaggaagtaatggaacgtatggaagaggatgccaag
gatttggaaaagatggcatccaagcagaatcttctgcaccagaagattgacgagtgcact
aagaagatcagggaccttggctccttgccctccgacgcctttgacaaataccagaatcta
gcaacaaagcagttgttcaagaaactagagactgcaaacacagagctcaagaaatactca
catgtcaacaaaaaggccttggaccagttcatatctttctctgagcagaaggaaaagctg
gtttctcggaaagaggaactggatagaggttatgacaagatcaaggagttgatgagtgtc
ttagaacatcgaaaatatgaagccatccagtttaccttcaagcaagtgtcaaagtacttc
agtgaggttttcaagaagcttgctcctcagggacatgctcagctcgttatgaagtctgac
caagatgaagaaagtgagcaagaagaacagggaactgtagacaacttcactggtgtcggc
atcagggtgtccttcactggccggaatgcggagatgagagagatgaaccagctgtctgga
ggtcagaagtctcttgtggctctggctcttatctttgccattcagaagtgtgaccctgcc
cccttctatctttttgatgaaattgatcaggcacttgatgctcaacacagaaaagcagtt
gctgacatgatccacgaactcagcaaggatgcgcagttcatcaccacaactttcagacca
gagctgcttgagcatgccaacaaattctatggtgtcaagttcaggaacaaagtgtcccac
gtggagtgtgtctcaagagaagaggcatacgactttgtggaagacgatcagacacatggt
taa
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