Penaeus chinensis (fleshy prawn): 125026677
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Entry
125026677 CDS
T08118
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125026677
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125026677
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
125026677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
125026677
NCBI-ProteinID:
XP_047471284
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All DBs
Position
1:complement(21765973..21862308)
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AA seq
980 aa
AA seq
DB search
MDFIIQKVNGRDVSGLSHSDAVRVFQEAQEPIMVQVLRRPAHNNNNNNNNNNNTSSGNTP
NAAQTQQQSASAPSSPSHAASPNGTPSTSASTCTTTAASGGARHHHEGELHAGPTATTGT
QTEMTLMGVGDWEVATSEWMGGVGVASDSDSPDGDYVFPGDLPQSLSQFLEQEIDIEEII
LERETPEEKLGLTLYYSNAPAPPPTHMAEQDEGVGVAEDEGEGVEDYKGVVTEVLVSQIE
QGTVASRDGRLRIGDQILQINGVELTTRAQTEELFAGCGTKVTLLVSRTQYYDEDDLVEG
EVLEDVVEEDEEVELLDANSEFHTGRSPAHSLKSNDSVEKKEEVRVKTGRSSSSSSSSSS
CERKPKRCSSASSTSSRGSQVREATGRPCTIEREMHALDAQMADIAHQCEQLEASHKTGP
RSPEPAYKVPLEQLQQQQQQQSKAVKNMCSRPPARTPLPAGSESEHIYESIPDVSESDEP
IYCVPYEPGRTRRRHTPATLMPATKPPLLLQKPTQPPPQQPQQQQQPQQQQSSGRGTRGS
GTSSSSGGSVRDRRTVEKQQSVERWVRENPHPRSPTHAAPTAPTAAHTHAHTAPTATTTT
TTTPVTNSVKRADAPQEERDSSSAYNTGDSTGSTHRPPPTLELSLGQDPALRQSTLTLCP
PTHDQSLQVSLESDTYSAISCDSCRRCMRLPPLQHSLPQKTTNGRGLEPDHTHPNTPQHG
HSQSSSQKAESESNRNYVTFLPAQTMYTNAANLQQTIWLQQQLFRQALHRGSTAPSTPTA
SHRGGLPPRAPPRTPQDEPVKMEWKVKRRPDGTRYITQRPVRSKLLKERALKINEERAGL
TTDDDAMSELKLGRYWSREERKRHLEKERERRRRHEMRRQQQQQQQLVHHPTPDDPPTAL
RTCTLENGVHQALWRDHSIRRKTSSTSDNAHKKLSSSSRRRTDVDEAAYGVRTPVHPANP
PVPHHTAQQMMKGLLSVTTV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcattcaaaaggtgaacgggcgcgacgtgagcgggctcagccactcggac
gccgtgcgggtgttccaggaggcgcaggagcccatcatggtccaggtgctgaggcggccg
gcccacaacaacaacaacaataacaacaacaacaacaacaccagtagcggcaacacgccc
aacgccgcgcagacgcagcagcagtccgcctccgcgccctcctcgccctcgcacgcggcc
tcccccaacggcacgccctcgacctccgcctccacgtgcaccaccacggccgcgtcgggg
ggcgcccgccaccaccacgagggcgagctgcacgcgggccccaccgccacgacggggacg
cagacggagatgaccctgatgggcgtgggcgactgggaggtggccacgagcgagtggatg
ggcggtgtgggcgtggccagcgactccgactctcccgacggcgactacgttttccccggc
gacttgcctcagtcgctctcgcagtttctggagcaggagatcgatatcgaggagatcatc
ctagagcgagagacgcccgaagagaaattgggtctcaccttatactacagcaacgctcct
gcacccccgcccacgcacatggcggaacaggacgagggcgtgggagtggcggaggacgaa
ggcgagggcgtggaggactacaagggcgtggtgacggaagtccttgtgtcccagatcgag
cagggaaccgttgccagtcgggacggcaggctgaggataggggatcagatcctgcagatc
aacggcgtggagctaacgacgcgggcgcagacggaggagctcttcgccggatgcgggacg
aaggtgacgctcctcgtctcacgaactcagtattacgacgaggatgacttggtcgagggc
gaggttttggaagacgtagtcgaggaagacgaagaggtcgagcttctagacgccaattct
gaattccacacgggccggtcccccgcccactccctgaagagcaacgacagcgtcgaaaag
aaggaggaggtccgcgttaagaccggtcgctcgtcgtcgtcatcatcgtcgtcgtcgtcg
tgcgagcgaaagcccaagcggtgttcgtcggcctcgtcgacgtcctcgcgcggctcgcag
gtgcgggaggcgacgggacgcccgtgcacgatagaacgcgaaatgcacgccctcgacgcg
cagatggccgacatcgcccaccaatgcgaacagctcgaggccagccacaagactgggccc
agatcacccgaaccggcctacaaggttccccttgagcagctgcagcagcaacagcagcag
caaagtaaggctgtgaaaaatatgtgtagccgcccgcccgccaggacgcccctgccggcg
ggctcggagtcggagcacatctacgagtcgattccggacgtgagcgagtcggacgagccg
atctactgcgtgccgtacgagcccggacgcacgaggcgccgccatacgcctgccacgctc
atgccagccaccaaaccgccgctgctgctccagaagcccacgcagccaccgccacagcag
ccgcagcagcagcagcagccacagcagcagcagagcagcgggcggggcacccgggggagc
ggcacaagcagcagcagcgggggcagcgtgagagaccggcggaccgtggagaagcagcag
tcggtggagagatgggtgagagagaatccgcacccgcgctcccccacgcacgctgcaccc
actgcacccaccgcggcccacacccacgcccacaccgcgcccacggccaccaccactacc
accacaacgcccgtcacgaactccgtgaagcgcgccgacgccccgcaggaggagagggac
tcctcgtcggcatacaacacgggtgactcgaccggcagcacgcaccgcccgccgcccacg
ctcgagctgagcctcggccaggatcccgccctcaggcagtccaccctcacgctctgcccg
cccacgcacgaccaatcccttcaggttagcctcgagtccgacacctactcggccatctcc
tgtgacagctgccgccggtgcatgcgactgccgcccctccagcactccctcccgcaaaag
acaaccaatgggcgcggtctagagccagaccacacccaccccaacacgccccagcacggc
cactcccagtcctccagtcaaaaagctgagagtgaaagtaaccgtaattatgtcaccttc
ctgccggcacagacgatgtacaccaacgccgcaaacctccagcaaacgatctggctccag
cagcagctcttccgccaggcgctccacagggggtccacggcgccctccacgcccaccgcc
tctcaccggggcggccttcctcccagggcgcctccgaggactccgcaggacgagcccgtt
aaaatggagtggaaggtgaagcggcgtccagacggcacacggtacataacccagcggcca
gtgcgaagcaaattactgaaggaacgggcgctcaagatcaacgaggagagagcaggtctt
accacggatgacgacgccatgtccgagctgaagctgggtcggtactggagccgagaggag
cgcaagcggcacctggagaaggagcgagagcgccgacggcggcacgagatgaggcgacag
cagcagcagcaacagcagttggtccaccaccccaccccggacgaccccccgacggcgctg
aggacgtgcaccctagagaacggcgtccaccaggccctgtggagggaccactccatcaga
aggaaaacctcctccacctccgacaacgcgcacaagaagttgtcctcgtcgtcgcgaagg
cggacggacgtggacgaggcggcctacggcgtccggacgcccgtccaccctgcgaacccc
cccgtgccccaccacacggcccagcagatgatgaagggcctcctgtccgtgaccacggtc
tga
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