Penaeus chinensis (fleshy prawn): 125026800
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Entry
125026800 CDS
T08118
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125026800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125026800
03036 Chromosome and associated proteins [BR:
pchn03036
]
125026800
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125026800
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125026800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125026800
NCBI-ProteinID:
XP_047471357
LinkDB
All DBs
Position
7:10903764..10933796
Genome browser
AA seq
1873 aa
AA seq
DB search
MFGQPRAPFGGTTSSFGASFGTPSTTTTGFGNTTFGRATFGNPQQTTSFGTTTTPFGGAT
SSGTSLFGTQQQQATGGLFGQQQTQQPTAGFSHPSSGFGSTSGGGLFGQTQQPTSTAGLF
GSTGTSGFGAQQSTQSRPFGFGQTTTSTTAGAGGLFGTTQPATGGGLFSGTTGFGATGGA
VTGTTVKYEPVTGTDTMTRNGVSTNIRTRIEVISTMKEYENKSLEELRVEDYLANRKGPG
QGTTLAGFGQTPQATSTQPQMQGTGLFGSGTGTSLFGTTKPPENKSLFGTGTTSGFGATS
GGGLFGSGTSTAAFGQTSTAPATSFSFNQTTQQQQKTGAFSFGTTPTSTPSLFGSTPQQQ
QQQPSFGFSGGFQLGQNTQQQNTGGGLFGNQKPGFFSNQNTGTGLFGSKPAGTTQPLSTG
FGTTNPVPPFGSTPNTSAGGGLFGAQNTQNKTGMFSGFGGSSGFGTTGLFGQNNNQQKPG
SLTFATPSFNPGLGQNLGSNTGMGLFNAGGTNTSGVGLGGGGLLSTNTGFGLPQQAAVGG
GAGGSAYPDLGKLVKALTEKPFLNITNNEKSSSDKATSPSDQGGSKLTSSNLKPTYVLSP
SLVANNKLKPKPITKNNNQGNDRHWLFKGLDDPNEESSEDFLKPKKYPSVRKLNLKVFKA
AKGDSSLSSPTISTTADKSGAGDAPSPLTTPVSPIGDGTPNRTSLPPSHDNSPTPDIIKG
REKIKSLNLRGKPQMNDTLADLNVVQMAGAEAMEGNLEAAENEEKDSSAEADKENISIFD
VSAAEDIPAMVNKSSDKPHPAGIKLTRSGYFTLPSLDVLAEMLDSDGQCLVENFTVGRYG
YGNVCFLGVTDVAGIDLDSVVFILRKQIEVYPEGTQKPPQGQELNKPAIITLDCVWPVDK
TTREVIKSSERLQAMGWADYLERQCVKMESTFVEYRPETGSWVFKVKHFSKYGLQEDDEE
EMVTSPPKTNVTAPLATHRAALGSTAAQLPPIPMRTSGPPATALTSPPQFGLSHMVMASL
PTKSMMQPRHLDSPSLQDTQAFEEEQMDSYIAKEAEESAAMTVLSPSAERLTVVSRVVPK
TVQLAKWQMFAGEEEEEAQQPTRESTPTPQLPRGSVKKLHLTTDISMNQTQRMTASPIPS
EPVKPKTVLQPQPVTLGSPPKANVQSESCPSAELLDPRSEYLLLQSGSNIGRESGHVPPQ
HQTALVPLESSLLAGKDHLSADMGAFMGRSFRVGWGPGWRFVHAGPKFTPTLMEEEDDLR
ILKENALSMPSPASFLFMGSVHSQPRMTATSDVPRYNLSVEKLHTVHQSPHYLTEASLER
VLEYSIVTCDEISDSTEPPCPHFRPVADVELLHQLAETASCFAQKDPTVSNIFDLCVALW
GRLDFYSPESDGESEYAISRVRVESLSLWLEAVSSAAVQEEVEVALNDEKNEESYLDAVF
AHLTARQISGACVLAQDKGDHHLALLLAQTCFGQDAQRSQGLGLVGGVSETSIKIFTPNL
YISRYVCPATATIAEALQEYEQAAGLKGDSPSYCDLPLPPYMMNQALPDQMKVSYDVCYH
LLKLFTDPMHQLEVLLNPATITPDPVDVSVSWLLWRVLESLGYSHLSQQVSANLHLSMAA
LLESAGNWHWAVFVLLNINDEERRSREVQELLRRHVAVGEEDESDPKYSMRERFVLEKLR
IPQKWLHQAKATKARALDMVDEEAWYLLKAGDYNRAHVLIVDTIAPNSIINEDHEYLHGY
LDQLCDDGVRSSVVDWAIGGGVYADYLDVCSVVEDMKKSADPTPAKLEQLRPRLLALCSR
LNNLKCHTATHRLCVSEMSRVVVGVLRAVVGEGTDATQVLSQQLSGLPLTHDYALAELNL
VTTHYLTHLAAER
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacagccacgagccccctttggaggcacaacgtcctcctttggggcaagtttt
ggaacacccagtacaacaacaacaggctttggaaacacaacctttggaagggccacattt
ggaaatccacaacaaacaacaagttttggaaccacaacaacaccatttggtggtgctaca
tcttcgggcacttccctctttggtacacagcagcagcaggcaacaggcgggctgtttgga
caacagcagacacaacagccaactgctggtttcagtcatcctagtagtgggtttgggtca
actagtggaggtggattatttggacagacacagcaaccaacaagcacagcaggcctcttt
ggcagcactggcacaagtgggtttggtgcacaacagtcaacgcagagtagaccatttggc
tttggtcagaccacaaccagtaccactgcaggagcaggaggcctgtttggtaccacacag
ccagccactggaggaggattgttcagtggtacaacaggatttggtgccactggaggagct
gtcacagggacaactgtcaagtatgaacctgtaacaggcacggacactatgaccagaaat
ggtgtatccacaaacattcggacacgaattgaggtcatctcaaccatgaaggaatatgaa
aacaaatctctagaagagctgcgtgttgaggactatttagctaaccgcaaaggtccaggc
caaggaacaactcttgctggctttggtcagacaccccaggcaacaagcacccagccacag
atgcagggaacagggttgtttggttcaggcactggtacttctctctttggaactacaaag
ccacctgagaataagtctctctttggcactggaaccactagtggttttggtgcaacctca
ggtggtggcctctttggaagtggaacaagcactgctgcatttggtcagactagcacagct
ccagccacaagcttctcctttaaccagactacacagcagcaacaaaaaacaggagccttc
tcctttggtaccaccccaacatcaacgccatcactgtttggttcaacaccgcagcagcag
cagcagcagccatcctttggctttagtggtggtttccaattgggtcagaacactcagcaa
cagaatactggtggtggtctttttggaaatcagaaacctggattcttctcaaatcagaat
acaggtactgggctgtttggcagtaaaccggctggcacaacccagcctctgagcactggc
tttggaaccaccaatcctgtaccaccatttggttcaaccccgaatactagtgctggtggg
ggactctttggtgcacaaaacactcaaaacaagactggaatgttctctggctttggtggt
agtagtggttttgggaccacaggcttatttggtcaaaacaacaatcagcagaaaccaggg
agcctcacttttgcaacaccaagttttaaccctggtctgggtcaaaatttgggaagcaat
acagggatgggcttgttcaacgcaggtggcacaaataccagtggtgtaggccttggcggg
ggtggccttttaagcaccaatacaggttttggattgccacaacaagctgcagttggtggg
ggagcaggcggaagtgcgtatccagatcttggaaaacttgtaaaggccttgacagagaag
ccatttttgaatataaccaataatgaaaaatcatcatcagataaggctacttcaccaagt
gaccaaggtggttcaaaactaactagctcaaacttgaaacctacatatgttctctcacca
tcactagttgccaacaataagctgaaacccaagccaattaccaagaataacaatcaagga
aatgacagacactggctctttaaagggctggatgatcccaatgaggagagctcagaagat
ttcctaaagcccaagaaatatcccagtgtaaggaagctgaacctgaaggtgttcaaggct
gctaagggtgattcgtccctgagcagcccaaccatcagtaccacggctgataagtctggt
gctggtgatgctccctctcccctcaccacgcctgtcagtcccattggtgatggcacgccc
aacagaactagcctccctccctcacatgacaactcacccacacctgacataatcaaggga
agagagaagatcaagagcctcaacctgagaggcaagccccaaatgaatgacacattggcc
gacctcaatgtagtccagatggcaggtgctgaagctatggagggaaatctggaagctgca
gagaatgaagaaaaggactccagtgctgaggctgacaaggaaaacatttctatctttgat
gtgtcagctgcagaggatattccagctatggtcaacaaatcgtctgacaagccacaccct
gcaggtatcaagctcactcggtcagggtacttcactcttccctcactggatgtgctggca
gagatgttggactcagatgggcaatgtctagttgagaatttcactgtgggccgttatgga
tatggaaatgtgtgtttccttggtgttactgatgttgctggcattgaccttgattctgtg
gtgttcatccttcgaaagcagattgaagtttatccagaggggacacagaagccaccccaa
ggccaagaactcaataaacctgctatcattacgctagattgtgtctggccagttgacaag
accacgcgagaggtgatcaaatcttcagaacgactccaggcaatgggatgggcagattat
ctggagcgccagtgtgtcaaaatggaatcgacttttgttgaataccgcccagaaactgga
tcatgggtctttaaggtaaaacacttctccaaatatggtttgcaagaagatgacgaggag
gaaatggtgacatctccacctaaaacaaatgtgaccgctcctttagccacccaccgagct
gctctcggctctacagctgcacagctccctcctattcccatgcggacatctggcccccct
gccactgccttgacctcacctccgcaatttggccttagtcatatggtcatggccagtctc
cccacaaaatcaatgatgcagccaaggcaccttgatagcccatcacttcaagatactcag
gcctttgaggaagaacagatggattcatatattgccaaggaagcagaggagagtgcagcc
atgactgtgctttcccccagtgctgagcgtttgacagttgtgtccagggttgtgcctaaa
acagtccagttggccaagtggcagatgtttgcaggtgaagaggaagaagaggcccagcaa
cccaccagagaatcgactccaacaccacagcttccccgaggatctgtgaaaaaacttcat
ctgacaacagatatttccatgaatcagactcagagaatgacagctagtcccatccccagt
gaaccagtaaaacccaaaactgtactgcagcctcaacctgtcaccttgggttcaccccct
aaagccaatgtacagagtgagtcttgcccaagtgcagaactgcttgaccctcgctcagag
taccttttattacaaagtgggagtaacattggcagggagtctggtcacgtaccaccacag
caccaaactgctcttgtgccacttgagtcctccctccttgccgggaaagaccacctctct
gctgacatgggagccttcatgggtcggtcattcagagtgggctggggtcctggttggagg
tttgttcatgctgggccaaaattcacgccaacattgatggaagaggaggatgacctaaga
attttgaaagaaaatgctttgtccatgccgtcgcctgcatctttcctcttcatgggatct
gttcattcacagcctagaatgacggctacatcagatgtacctaggtacaacttgtctgtg
gagaaattgcacacagtccatcaaagtcctcattatctaacagaagcaagcctggaacgt
gttttagaatacagcattgtaacctgtgacgagattagtgattctactgaaccaccatgt
cctcatttccgacctgtagcagatgtagaactgctccaccaactagctgaaactgcatcc
tgttttgcacaaaaggatcccactgtatcaaatatatttgatctatgtgttgcactctgg
ggaaggctggatttctactctcctgaatctgacggggaaagtgaatatgctatttcacgg
gttagagtcgagtccctcagcctgtggttggaggctgttagcagtgcagctgttcaggag
gaagtggaagttgctctcaatgatgaaaagaatgaagaaagttacttagatgcagttttt
gcgcacctgacagctcgacagatttcgggagcttgtgtccttgcccaggataaaggtgat
catcatcttgctcttctgttagcccaaacctgctttggtcaggatgcccagagatcccaa
ggactggggttggttggtggggtgtcggagacatccattaagatatttactcctaattta
tatatttccaggtatgtatgtccagccacagcaacaatagcagaagcattacaagagtac
gaacaagctgctggtctaaagggtgattctccaagttattgtgatctgcctttaccacct
tacatgatgaatcaagcgttacctgatcagatgaaagttagctatgatgtctgttaccac
cttttgaagctgttcactgatccaatgcatcagttggaggttcttcttaatccagcaact
ataacacctgaccctgtcgatgtatcagtaagctggctcttgtggcgtgtcctagagagt
ctgggttattctcatctctcccagcaagtcagtgccaatttgcatttgagcatggcagcc
cttctagagtcagcagggaactggcactgggcagtctttgttctactgaacattaatgat
gaagagagacggagtagagaggtccaggaattgctgagacgacatgtagctgttggagaa
gaagatgagtcagatcccaaatacagtatgagggagagatttgtacttgagaagttgcgc
ataccccagaagtggctacatcaagccaaagccaccaaagctcgagcattagacatggtt
gatgaggaagcttggtatcttctgaaggcaggcgactacaaccgtgcacatgtacttatt
gttgataccattgctcctaattcaatcataaatgaggatcacgaatacctacatggatac
ctagaccaactttgcgatgatggagtccgtagtagtgtcgtggattgggctattggaggc
ggcgtttatgctgactaccttgatgtctgttcagtagtagaagacatgaagaagtctgca
gatccaacacctgccaagcttgaacagttgcgacctcgtcttcttgctttgtgctccagg
cttaacaacctcaaatgtcacactgccacacacagactgtgtgtatcagagatgagccga
gtggttgtgggagtcttgagagctgttgtaggtgagggaactgatgccacacaggtccta
tcacagcagctgtccggtctgcccctaacacatgactatgctcttgctgaacttaacctt
gtcacaactcactatctcacacatctggctgctgagaggtga
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