Penaeus chinensis (fleshy prawn): 125027106
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Entry
125027106 CDS
T08118
Name
(RefSeq) low-density lipoprotein receptor 1-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125027106
Membrane trafficking [BR:
pchn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125027106
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
Motif
Other DBs
NCBI-GeneID:
125027106
NCBI-ProteinID:
XP_047471887
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Position
7:31181..41719
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AA seq
892 aa
AA seq
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MRWPRTVCSFAIVFTLVVSCSNTVQGENSHCSITAFTCKTGECIPKSWRCDGAPDCQDNS
DEDPDECPERSCKQGEFQCGDGKCIPHRWQCDGEVDCDDKSDEDSKYCDDVECEADEFTC
HNKGNLSNCIPLNWVCDEFADCDDKSDEVSCNATCTSEQFTCASGKCISKRWHCDGDSDC
GEGDFSDEIGCPNKTCTVNEVTCPDGKCISHSQVCDGNEDCINGTDEHDCPSNTCGEDDY
MCAGHFECIRQAWLCDGDMDCPGNDDENEENCPHRCPEDHFMCGDQSCIHKRLKCNGFNE
CIDGSDEEHCQKRCNEEYEFNCGDKCIAMDLVCNGKRDCENSADEPTDGSCGRNECEELN
GGCTQECVDTRAGHYCKCKPGFMLVNSTLCEDINECLEPGQCSQVCINLKGSFKCECVGG
YARDPHNPQRCKAMEGHASLLFAHFIDIRKISLDHQEITAIVNETRGSTALDFVFKTGMI
FWTDALDECIYKAPIDEGSKKQVVISEEVTTVDGLAVDWLYNHIYWTNNDRDTIEVADFN
GDMRKTLYQDRIEQPRAIAVYPSEGWMFWTDWGQNAMIERGGMDGKFREPIITEEIRWPN
ALTLDLVLRKIYWSDSKFHSIYSCNFDGSQRRVVLHSSEYLPHPFSITVFGDTMYWTDWY
REAILRANKFTGQDVETIADSHATPMTVHVYHSYRQPNGTNHCTPLNGLCTHLCLPAPQK
SPSDSKITCACPDGLVLMSDGLTCESKDGIETRTQLPNPDPIPITHNMEDEMRSTLAPAI
VDFTPKKDLPSDTESGNVAVAAILAAIGVLCVASAMAYMIYRYFRKRSVHSMNFDNPVYK
KTTTEDGFHLAGQQRTNCPRNSGQPRYQHQQYGVASPEDSLEPLTHSNNNFV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggccgagaacagtctgctcgttcgcgatagtgttcaccctcgtcgtcagctgc
agcaacaccgtgcagggagagaatagccattgttccatcaccgccttcacgtgcaagacc
ggagagtgcatccccaagtcgtggcgctgcgacggggcgcccgactgccaggacaacagc
gacgaggaccccgacgagtgcccagagagatcgtgcaagcagggcgagttccagtgcggc
gacgggaaatgcattccccaccgctggcagtgcgatggtgaagtggactgtgacgacaaa
agtgacgaagactccaagtactgtgatgacgtagaatgcgaggctgatgaattcacatgc
cacaataagggcaacctatcgaattgcatcccccttaactgggtttgtgatgaattcgcg
gactgtgatgataaatccgacgaggtgtcatgtaatgcaacgtgcacatcagaacagttc
acatgtgcatcagggaaatgcatttccaaacggtggcactgtgacggagatagtgactgc
ggtgagggagatttctcagatgaaattggatgtcctaacaagacatgcactgtcaatgag
gtgacttgtcctgatggcaaatgcataagtcacagccaggtttgcgatggaaatgaagat
tgcatcaatggcacagatgaacatgattgcccatcaaacacctgcggcgaagacgattac
atgtgtgcaggtcacttcgagtgcatccgtcaggcatggctctgcgatggcgacatggac
tgccccggtaatgacgacgaaaatgaagagaactgccctcatcgctgccccgaagatcac
ttcatgtgcggtgaccagtcatgcattcacaagcgactcaagtgcaatggattcaatgaa
tgcattgatgggtcggatgaggaacactgccaaaaacgttgcaatgaggaatacgagttc
aactgcggggacaagtgcattgcaatggatctagtgtgcaatggcaagagagactgtgaa
aattcagctgatgagcccactgatggaagctgtggtaggaatgagtgtgaggagctcaat
ggtggttgcactcaggagtgtgtagacactcgtgctggacattactgcaagtgcaagcct
gggttcatgcttgtcaatagcaccctgtgtgaagacatcaatgagtgcctggagcccggg
cagtgttcacaggtgtgcatcaacctcaaaggctcattcaagtgtgagtgtgtcggagga
tatgccagagacccccacaacccccagcggtgcaaggctatggaaggacatgcctccttg
ctcttcgctcacttcattgacatcaggaagatctctcttgaccatcaagagatcacagcc
atcgtaaatgagactcgtggttccacagccctagactttgtcttcaaaactggaatgatt
ttctggacagatgcacttgacgagtgcatttacaaagctcctattgatgaaggaagcaaa
aagcaagttgtaatatctgaagaagtgacaacagttgatggtctagcagttgactggtta
tacaatcacatatactggaccaacaatgatagggacacaattgaggtggcagattttaat
ggtgacatgagaaaaacgctctaccaagaccgcattgaacagccccgagccattgcagtg
tacccctcagaaggctggatgttctggactgactggggtcagaatgccatgatcgagaga
ggaggcatggacggaaaattcagagagccaatcatcactgaggaaatcaggtggcccaat
gccctgactcttgaccttgtgcttcggaaaatctactggtcagactccaagttccactcc
atttattcttgtaattttgatggatcacagcgtagggttgtcctccactcttccgagtac
cttcctcacccattttccatcacagtcttcggggacaccatgtactggaccgactggtac
agagaggccattctgcgtgccaacaagttcaccggtcaagatgttgaaaccatcgccgac
tcgcatgccacaccaatgactgtgcatgtgtaccacagctaccgccagcccaatggcaca
aaccactgcactccactcaatggtctttgtacccacttgtgtctacctgcaccccagaag
agcccctctgattcaaaaattacctgtgcctgtccggacggccttgtgctcatgtctgat
ggcctgacttgcgagagcaaggatggcatagaaaccaggacccaattgcccaacccggac
cctatcccaataacccataacatggaagacgagatgcgcagcaccctggccccggcgatc
gtggacttcaccccgaagaaggacctgccgtcggacaccgagagcggcaacgtcgccgtc
gccgccatccttgccgccatcggcgtcctctgcgtggcctcggcgatggcctacatgatc
taccgttacttccggaaacgttcagtacacagtatgaacttcgacaaccctgtatacaag
aagaccacgaccgaggatggcttccacctcgcggggcagcagcgcaccaattgcccgagg
aattccggccagccacggtatcagcaccaacagtatggggttgcatcgcccgaggattcg
ctggagcccttaacgcacagcaacaacaacttcgtatga
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