Penaeus chinensis (fleshy prawn): 125027122
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Entry
125027122 CDS
T08118
Name
(RefSeq) focadhesin-like
KO
K27498
focadhesin
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125027122
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125027122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
125027122
NCBI-ProteinID:
XP_047471917
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Position
7:complement(8173010..8176274)
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AA seq
1219 aa
AA seq
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MEDYEQKINSGNVFLQSQAVTKLHTKLLENVQEGESLYDREEVKWLWQTANKGDMTEATL
AIEILIALAKAGFLPVPATLQNFLADVMCAKSPRAIVQGITEIVLMSQTDSDNSGETEFP
FTGPPKGPTHPYVTLITKRPDLTSTVLEEVASMLRHPDNRLRSLSIWHVRPLVLHAFCMT
ENTLPVARPLISLIVNSHSAQLGLDFVPLLSRIVTLIKDSSKDHIERKMMVLLALTEIAI
ADNSARLQSALLPCLVMMVPLAWKQGLGTRTIERYMNILVSRLGRGCDVTLCALAEVIPQ
TSGQLQVNLLKLGATLLSNKDGNPLIGARLLPSLLQVLSAPCTSIPGLTTAAAAVVSLIQ
ATPAQASANTQLAGNAHWETLCCTFSSLVSFIPALEFSDRLVRDPQLASDWLSKLATSIN
QISSFHHTFVTSVFLYQGSTSQSIQEATKVLEKEVMKKKSLSLEVFPMVLYRLGREPDPA
TRLTILYTLPSLAVNKLCVALVLKTLLALWGSGSLRPLVLRLVYDLWTVEPRTYSYLSQL
INDRSINSAEVQIARAFVVTSICKSKPSQHGEELLPLLSKVLNECRGNEGTAQALIALDG
IYALCSNQVIDLRTTWRVIAPKLVRDNRPEITVKLCNLLGLVPTLHVESSEYEKFTENSL
IILWNWVSHHHSLDVVEAAYKSLENYKYGSYTLRMLPKYAREGHQLPPSMAATPFEAARN
PVDVLDYVPAVGWIKLMKGCPESHIPHVQNFIKSLVAREVAGLPKGIYMTAVQEAKRRGV
KGSGGQPEPPSYSFLKDTSILRTLVNFLIDFPDMLENCSETAQKQRLLRCAVLAMESLGQ
PLPRPYPALDWIFLEKVLYAAQSVSNTDWTTRIRHSLFRIAARQSNKSPSACNLVSQWMV
PAPTNGLTKEDEITLFGLLDHIGRGVPPNFLQPFIAYIFQQRISDPKHMKAILESVKPVL
TADFIFDTNRNVLSNAIEHLNENMDPTDEDVYNTYKACVADLPQKHIERLTSPSLWWEVT
NERLYRAAVLRCHVAEKDPEEMALPWLNDLVDSAASLPGDRSHLLSVMSNTLVTRCHVNE
STSWFLQLLGRLRDHLKRKTDDNLVAVHEQQQRITFYLDLLVMGLIVWSGLWATNHMQVL
AETSALRDRLLLPSLVTLSGQPAWVQTLSQFLNWMVSCHTLLQDYNASRYHLASPTLLLA
TLNPSISQIMWNKVIAMLV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaagattatgagcaaaagatcaactcggggaatgtgttccttcagagtcaggctgtg
accaaactccacaccaaactgcttgaaaatgtacaagaaggagagtccctatatgatagg
gaagaagttaaatggctgtggcagactgctaacaagggagacatgactgaggcaacgctg
gccatagagatcctgatagcgcttgccaaagctggtttccttccagttccagcaacgttg
caaaacttcctggctgatgttatgtgtgctaagtctcctcgagctattgtgcaaggaatc
acagagatagtgttaatgtctcagactgactctgacaacagtggagagacagaattccct
tttacaggccctcccaaaggcccaactcacccatatgttacacttatcactaaacgacct
gatctgacatccacagtcctcgaggaagtggccagtatgctgcgacatccagataacagg
ttaaggtccttgagtatttggcatgtccgtccacttgtacttcatgcattctgcatgaca
gagaacaccttaccagtggctaggcctctgatatccctgattgtaaattcacattctgcc
cagctaggccttgactttgttcctctgctatcaagaattgttactcttattaaagatagc
agcaaagatcacatagaaaggaagatgatggtactacttgctctaacagaaattgcaata
gctgataattctgcaaggctgcagtcagctctgttgccttgtcttgtcatgatggtgcca
ctggcatggaagcaagggttaggaacaaggacaatagagagatatatgaacatactggtg
tcccgcctaggaagaggatgtgatgttaccctttgtgctttggcagaagtcatacctcag
acttctggacagctacaagtaaatctactgaagttaggtgcaactcttctttcaaataaa
gatggtaatcctttgattggtgcaaggttgttgccatcattactgcaggtgctgtcagct
ccctgcacaagtattcctggcctgacaacagccgctgcagctgtagtatctcttatacag
gcaacaccagctcaagcttcagctaatacccagttggcaggtaatgcacactgggaaacc
ttatgctgcacattttccagtctggtttccttcataccagcactggagttctcagatcgg
ttggtcagggatccacagctggcctctgattggctgtccaagcttgctacatccatcaat
cagatttcaagctttcaccatacttttgtgacatctgtgtttttgtaccaggggtctaca
tcacagtcaattcaagaagcaactaaggtactagaaaaggaggtgatgaagaagaagtcc
ctctccttagaagtattccccatggtcctctacagactaggtcgtgaacctgacccagca
acacgtctcacaatactgtacactctgccatcattagcagttaataagctatgtgttgca
ttggtgctgaagactctccttgctctgtgggggtctggttccctgcgcccacttgtcctg
cgtctcgtgtatgatctgtggacagtagaacctcgaacttactcatacctgtcacagctg
attaacgataggtcaataaattctgcagaagttcagattgcaagggcatttgttgtcacc
agcatttgtaaatcaaaaccttcccagcatggcgaggaattgctgccgctgctctcaaag
gtgttgaatgaatgccgtggtaatgaggggacagctcaagccttgatagcccttgatggt
atatatgctttatgctccaaccaagtcatagacttgcggaccacttggcgagttattgct
cctaaattggtgagagacaataggcctgaaattactgtaaaattatgcaatctcctaggg
cttgtcccaacactccatgtagaaagctcagagtatgagaaattcacagagaactctctt
ataattctgtggaattgggtcagtcatcatcatagcttagatgtagtggaagcagcatat
aagtcactggaaaattacaaatatggcagttataccctgagaatgttaccaaaatatgca
agggagggacaccagttgccacctagcatggccgcaacaccctttgaagctgcacgtaac
ccagtggatgtcttggattatgtccctgctgtaggctggattaagttgatgaagggatgt
ccagaatcccacatcccacatgtgcagaacttcattaaatctctagttgcacgagaagta
gctggacttccaaaaggaatctacatgacagccgttcaggaggcaaagcgcagaggtgtc
aaaggtagtggtggtcaaccagagcctccttcatacagtttccttaaagacacctcgata
ttgagaactcttgtgaatttcctaatagacttccctgatatgttggaaaactgctcagaa
actgctcagaagcagagattgctaaggtgtgctgtgttagcaatggaatctttgggtcag
ccattgccacggccatatccagctttagattggatatttttggaaaaggtactttatgca
gcccagtcagtttcaaatacagattggacaacaagaattcgacatagtctctttagaatt
gctgcaagacagagtaataagtccccctctgcatgtaacctggtaagccagtggatggta
ccagcaccaaccaatggcttaaccaaagaagatgaaattacactttttgggctgttagac
cacattggtcgtggagtccctccaaacttcttgcagcctttcatagcatacattttccaa
caacgcatatctgatccaaaacatatgaaagctatattagagtcggtaaaaccagtcctt
actgctgacttcatctttgacactaatagaaatgttttgagtaatgctattgaacatcta
aatgaaaatatggaccctacagatgaagacgtttataacacctacaaggcatgtgttgct
gacctaccacaaaagcacatagaacgactaacctctccatcactttggtgggaagttaca
aatgagagactgtacagagcagctgtgctacgttgccatgtagcagagaaggatccagag
gaaatggctctgccctggctcaatgacttagtagactctgcagcttctttgcctggtgat
cgctcgcatttgcttagtgtcatgtcaaacactttagtaactaggtgccacgtaaatgag
agcacctcatggttcttgcagctactaggacgactgagagatcacctgaagagaaagaca
gacgataaccttgttgcagtgcatgagcagcagcagcgcattactttctaccttgatctt
ttggttatgggtcttattgtgtggtcaggcttatgggccacaaatcatatgcaggtcctt
gcagagacttcagcactgcgagatcgccttctccttccttccttggtgacgctttcgggt
caacctgcatgggttcagactctcagtcagtttcttaactggatggtttcatgccatacc
ctcttacaggattataatgcatctcgttatcaccttgcctcacccacactcctccttgcc
acgctcaacccaagtatttctcagattatgtggaataaagttattgctatgcttgtataa
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