Penaeus chinensis (fleshy prawn): 125027123
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Entry
125027123 CDS
T08118
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125027123
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125027123
microRNA pathway
RISC loading complex
125027123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Mdv1
dsrm
Motif
Other DBs
NCBI-GeneID:
125027123
NCBI-ProteinID:
XP_047471918
LinkDB
All DBs
Position
7:42941974..42973473
Genome browser
AA seq
2472 aa
AA seq
DB search
MMNRVQPENVHSTIFTPREYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRS
KEHGGKGQRTLLTGWSGPGLVRAGEAIQQNTNLAVTTYTRLEQVESWLPSRWSQTFTEAQ
VVIMTVDVLEKGLETGLLQLDMLNLLVITDAHRVATFPPLIKVLNLCRGCRILGMTSPVL
SHACSPPQLESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIVMCRDPDPDERTEVEL
EVRRLVGEALSFLDNHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLNNLGLWC
ADRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEQTFDKYSELDQILKFST
PKVLRLVEILRQVRPLNFVDPRKRRDRLEALENGKSAAALEGSEDTQENKTSAEDKNVQE
DPTKLATDGGNTENLQESASKSETEMSCEGSEEPSDTTLCVQGSIYGISEIPLVSSGDGA
IDPNDECEVNSENAMPDLKAVGELSEGHSQIHGTEPASEDPLADENSTDDKSELSHGAPS
NMFCGSSIEDSSEVVDISTDGGYFTAVSDVSPKCTSKAVSDSYTNDIEDCMMKANCNNHE
VNVSRMTEVNTENFCAEVTDKYSCLQDSLEDGVDFTKPSMKERAADDMHITVQTCPETTQ
YCSNACEDVVAKTNDEDGSALENSLCRLNIKESSCTDGCDTESIKSCDLHNGVLSAKNDL
LDTAMIQNVKNMTLCNGFEHGSKEDIMDSEKDITSKMNGHVDPSEYDSESEDISDRYKSC
ESVQSQASVDTSSKEGSISDTFVPSATSYLPCKADATSAVDETATPSDSAPNEQELPTCT
SGVENTEDPALVSTSGTTQNTTICSDSAAFSNASNGTQPTTQTVSSEAAAMADTLAMLLP
NSGKGRKRRDDVKEKVKVHNPEDPDSVCGLIFVHHRSMAKIIYRLLKELSDIGGDFAWIF
PQYTVEAKESVKEDPRAAEAEHKKQEEVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLR
FDPPSDYRSYVHSCGRARGHDTFYFHLITKNQELSFLHDMATYSAFKQVLVSHCGSVELG
TDREVLSSEANAAHAPYITPAQAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEE
AEAEIPTYKCKIMLPINSPLKGTIEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQPV
GKESMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYKL
DMVLTCPIPDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIE
RKVNVTQDQLSALQYFHKFTFTHVLRLEKYPIKFDPTNARTAFYIVPLNKFNGSEGIDWD
FVKEIQSEGDPRPVPPQDDARKKFQFQHDLYEDAVVMPWYRNQDQPQYFYVAEICTHLNP
QSDFPDAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTS
EETKRAKRENLQQKQILVPELCTIHPFPASLWRKAVCLPTILYRINALLLADQLRLSVAS
EVGLGLQTLLPDFSWPPLDFGWSLADVLRKNQENQEQDDKSNIASEATNSKQKATKTENS
ECESPTLAAKKKAPKKGNDMEIGTWSNDMAVDPPTPPFDMDTMNGPDEFEIDTFDPNVAL
PDNLTLLNGFSGADDDIEGELGADWGTGITERRTKSSCNKDSKGGMFRVGSPSNFESDGW
DMFGSSGYNGGYGGYGSYDAYGGYGDFQGLADDLEGCESDVSSDMDDDDKSQTEKLWDEE
GTKRRSSMAADEGSSDEEIDLNWPDEDEEVRNDKEKEFQSFLEDKQKIIKESSCYLAESE
SLLIEKAHRKLQNESKSSPEKVSHRTESSTTEGCEQLSSKGCDNAQQSTSNMIRTVNRDE
TLALTRPDSEVQCPSWNSICEEMSFSFDFQPDLLNHPGPSPSVILQALTMSNANDGVNLE
RLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVATK
FEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQIK
RSKSEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGAL
LFMSWLGIKVLPCTLESSPEASELITYGHLESPQSPLYHCPFTDTRKDLDLLLSGYQVFE
EKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPG
ALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYFM
EEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAVWSVYYTMMCREIEQFSGVVPK
SPIRELLEMEPETAKFGKPERLVDGKVRVSVEIFGKGSFSGVGRNYRIAKSTAAKRALRH
LKKLQMMANQGI
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgggtacaaccagaaaatgttcactccaccatatttactccacgagaatat
caggtggagttggtggatgcctgcctcaaagggaataccctttcagtgctggcctcccgc
tccaccaggacattcctcatcaccatggtcacacgagaaatggcccatctcaccaggagc
aaggagcatggaggcaagggacagcgaacattactcactggttggtcagggccagggctg
gtgcgtgcaggcgaggctattcaacaaaataccaacttagctgtgaccacttacactcgg
cttgagcaggtggaaagctggctaccttcacgatggagtcagacttttacagaggcccag
gtggtaattatgactgtggatgtacttgaaaaagggcttgaaactggattattacagcta
gacatgttgaacttgcttgtaattaccgatgcacatcgtgtagcaactttccctccttta
attaaggttttaaatttatgtcgtggatgtaggatccttggcatgacgtcaccagtccta
agtcacgcctgttcgccaccacaattagaatccttccttacacaccttcaggatgctaca
tcttgcgtggtagacacttcctcagaaattgtcactgtccttaggtatgtaaataaacca
gttgagaagattgtgatgtgccgtgacccagaccctgacgaacgtacagaagtagaacta
gaagtgcgtaggcttgtgggagaagctcttagttttcttgataatcatcgctatgatttg
gtggaagtctatggtccagaataccaagaattttgtgatgatctgccagaccccaacaaa
gagccaaggcagatattgatggatttccttgatgtgctcaataatttaggattgtggtgt
gctgaccgtgcagcattgtatgcactagtggaagttgagaaacttaagaaaaaaacagct
tatgacaggcattatctcctgttgtgcatgatcttcactgtcatggcacgtataagagct
gttgttgagcaaacatttgataaatattctgaattagatcagatcttgaaattctcaact
ccaaaggtattgcgcttggtagagatcctccggcaggtccgacctctcaacttcgtagat
ccacggaagagaagagatagattagaagcgttagagaatgggaaatcagctgctgctctt
gaaggtagtgaggacacacaggaaaacaaaacttcagcagaagataagaatgtgcaggaa
gatcccacaaaacttgccactgatggaggaaacacagaaaatctacaagaatctgcctcc
aaatcagaaactgaaatgagctgtgaaggttcagaagagccaagtgatacaacattatgt
gttcaaggaagcatttatggaatttcagaaattcctcttgtaagctcaggagatggtgct
atagatccaaatgatgagtgtgaggtaaacagtgaaaatgccatgccagacctcaaagct
gtgggagagctgagtgaaggccattctcagatccatggtacagagccagcatcagaagat
cccttagctgatgaaaattccacagacgataaatcagaattgtctcatggagctccctct
aacatgttttgtggatcatccattgaagattctagtgaagttgttgacatatccactgat
ggaggatattttactgctgtctctgatgtttctccaaaatgtacaagtaaggctgtgtct
gattcgtatacaaatgatatagaagactgtatgatgaaagcaaattgtaataaccatgaa
gtgaatgtgtcaagaatgactgaagtaaatactgaaaacttctgcgctgaagtaactgac
aaatatagttgtttacaagatagcttggaagatggagtagacttcactaagcccagtatg
aaagaaagagctgctgatgatatgcacattacagtacaaacttgccctgaaactacacaa
tattgttcaaatgcctgtgaagatgtagttgctaagactaatgatgaggatgggtcagca
ttagagaacagtttatgtaggcttaatattaaggaatcatcttgcacagatggctgtgat
acagaaagcattaagagctgtgatctacataatggagttctgagtgccaaaaatgatttg
ctagacactgccatgatacaaaatgtgaaaaatatgactctatgcaatggatttgagcat
ggcagtaaagaagatataatggattctgaaaaagacattacaagtaaaatgaatggccat
gttgatccaagtgaatatgattcagaaagtgaagacattagtgatagatataaaagctgt
gaatcagtacaaagccaggctagtgtggatacttccagtaaagaaggctccatatcagac
acatttgttccctctgctacctcttatctgccttgcaaggcagatgctacttctgctgtt
gatgaaactgcaactccatctgattctgcaccaaatgaacaggagttacctacttgtacc
agtggtgtggaaaacactgaagatcctgctttagtttctacttcagggacaacacagaac
acaaccatttgttctgactctgctgccttttccaatgctagtaatggtactcaacccaca
acacaaacagtgtcatcagaggcagctgccatggctgatactttggccatgctattacca
aatagtggtaaaggacggaaaagacgagatgatgttaaagaaaaagtaaaggtccacaat
ccagaagatcctgattctgtttgtggcctcatttttgtgcatcatcgaagcatggccaag
attatatacaggctcttaaaggaactgagcgacattgggggagattttgcttggattttc
ccccagtacactgtagaagccaaggaaagtgtaaaggaagatcccagggctgcagaggca
gaacacaagaagcaagaggaagtactcaggagattccgacatcacgagtgcaatatactt
gtctcaacacgtgtgttagaagaaggaattgatgttccacagtgtaatctggtactaagg
tttgatcctccctcagattatcgctcgtatgtccatagctgtggtcgagcaagaggccat
gacactttctattttcacttgattacgaagaaccaggagctcagctttcttcatgacatg
gctacctattctgcatttaaacaggtgcttgtaagtcattgtggcagtgttgaattggga
acagacagagaggttctgtcatcagaagccaatgcagctcatgccccttacataactcca
gctcaagcagcggttacaatggcttcagctatagggctcttgaacaaatactgtgctaag
ttaccaagtgacactttcactcgtctaactgctatgtgggatgtagaagaaatagaagag
gcagaagctgaaataccaacatacaagtgtaagatcatgttgccaatcaactcgccattg
aaaggaaccattgagggtccatggcaaagcaaagtttcactggctaagatggccgcagct
cttgagtgttgtcgaagacttcatcagatgggagagttagacgatcagcttcagccagta
ggaaaggaaagcatgaagttagatgatcacctgtgtgctccacctgctgatgaccaggtg
ccagaggggatgcctcggccaggaacaacaaagaggagacagtattattataaaaaggtt
gctgtttgtctgactggggaacaaccaaaacaaggactagatttgtttgtttataaacta
gatatggtgctaacttgccccatccctgatgaacaaaacacccgtggtcgtaagatttac
cgtccggagcagtcctcacgttcatttggaatcatcacaacaaagccgatctcacaggtc
agtggatttccagtattcactcgttcaggggaagtcgttgtccatgttcaagaaattgaa
aggaaggttaatgtcactcaagatcagttgtcagccttacagtacttccataagttcacc
ttcacacatgtcttacggctggaaaaatatccaatcaagtttgatcctacaaatgcaaga
acagctttctacattgtacctctaaacaagtttaatggaagtgaaggcattgattgggat
tttgtaaaggagatccagtctgaaggagatccgagaccagtccctccacaggatgatgca
aggaaaaagtttcagttccagcatgatctgtatgaggatgcagtagttatgccttggtac
agaaatcaagatcagcctcagtatttttatgtagctgaaatttgcactcatctcaatcca
caaagtgattttccggatgcagggtttgagaccttcgaaaaatactacctaactaaatat
ggccttcaaatatgtaaccttgctcagcctttgcttgatgttgaccacacatctggaaga
ctgaatctgcttacgccacgtcatgttaacaggaaaggagtggcactgcctaccacctca
gaagaaactaaacgtgccaaacgagagaaccttcaacaaaagcagatcttagtacctgaa
ttgtgcaccattcatccgttcccagcctccttgtggcgaaaagcagtatgtttgccaacc
atcctctatcgtattaatgctttacttcttgctgatcaactaagactctcagtggcaagt
gaagttggattaggactccagactcttctaccagatttttcctggccacctttggacttt
ggttggagtttagctgatgttctcaggaaaaaccaggaaaaccaagagcaagatgacaaa
tcaaacattgcttcagaagccaccaacagcaagcagaaagccaccaaaactgagaactca
gaatgtgaatctccaactcttgcagcaaaaaagaaggctcctaaaaagggaaatgacatg
gaaattggcacatggtcaaatgatatggcagttgatcctccaacacctccatttgatatg
gacacaatgaatggaccagatgaatttgagattgatacattcgatcccaatgtagcccta
cctgacaacctgactttactgaatggattttcaggtgctgatgatgatatagagggtgaa
ttaggggctgactggggcactggcattactgaacgccggaccaagagcagctgcaacaaa
gacagcaaaggagggatgttcagagtgggttcaccttccaattttgagagtgatggctgg
gacatgtttggtagttcaggttataatggtgggtatggaggatatggttcctatgatgct
tatggtggttatggagattttcagggtctggcagatgatcttgaaggctgtgagtctgat
gtttcatctgacatggatgatgatgataaaagtcagacagaaaaactgtgggatgaggag
gggaccaaaaggcggtctagcatggcagctgatgaggggtcatcggatgaagagattgac
ttgaattggccagatgaagatgaagaagtacgaaatgataaggaaaaagaatttcagtca
tttttagaggataaacaaaagattataaaggaaagttcctgctatctggcagaaagtgaa
tcactactaatcgaaaaggcacacaggaaactgcagaatgaaagcaaatcatccccagag
aaggtttctcatcgtactgaaagttctactactgaaggctgtgaacaattatcttcaaaa
ggctgtgataatgctcaacaatctacctcaaacatgattagaactgtgaacagagatgaa
actcttgcacttacaaggccagactctgaggtacagtgtccttcatggaacagcatttgt
gaggaaatgtcattcagttttgatttccaacctgatcttcttaaccatcctggaccatca
ccaagtgtcatactccaggcactaacaatgtctaatgctaatgatggagtcaatttagag
aggcttgaaaccataggggattcttttctgaaatatgccatcacaaccttcctctattgt
acttatccacaacgtcatgaagggaagcttagttacctacgttcaaagcaagtcagtaac
ctgaatctctatcgtttaggcaagcggaaagggcttggagagtgtatggttgccacaaaa
tttgagccacatgataactggctgccacctggatactttgttccaagggaattagaggaa
gctttgattgactctggggtacctgcaggtcattggaatatggcagacctacctggactt
catgacttggcaagtgatgaaattagacggctagttcaggagcgttcagagcagatcaag
cgtagtaagagtgagcaggcaactagtgaactcatggctacacagaatccacatgatctg
ccaatatttatcccgtacaatttgctcacacagcacagcatcccagacaaaagtattgcc
gattgtgtagaagccttgattggtgcttacttgactacatgtgggccacggggtgcttta
ctatttatgtcttggcttggaatcaaagtgctaccatgtacattagaaagttctccagaa
gctagtgagcttattacatatgggcacttggaatctcctcagtctccactatatcattgc
ccttttactgacaccagaaaggatctggatttgcttcttagtggataccaagtgtttgaa
gaaaagattgggtacacattccgcgatcgttcatacttgttgcaggccttcacacacgcc
tcttactataaaaatcggttgactgactgctaccagaggcttgaatttctaggagatgct
gttcttgattaccttataactcgtcatttgtatgaggacaagaggcaacattcaccaggt
gcactaactgaccttcggtcggcattagtcaataatacaatatttgcatccctggctgtc
aaatatgactaccataaatacttccgccatttctcacctggtttagatcgagttatcagg
gactttgtgaagatgcaagaggaaaatggccataaaatcaatgaggagtactacttcatg
gaagaagatgaatgtgaggcagcagaagacatcgaagttcctaaagcccttggtgatgta
tttgagagtgtagcaggtgcaatctttcttgactctggtagctccttggatgcagtgtgg
tctgtgtactatactatgatgtgtcgggagatagaacagttcagtggagtggtaccaaag
tcacccattagggagttgctagaaatggaaccagaaacggccaaattcggaaagcctgaa
cgtcttgttgatgggaaggttagagtgtcagttgaaatatttggaaaaggatcattttca
ggagttgggaggaattatcgtattgcaaaatcaacagctgcaaagagggctctgagacac
ttgaaaaagttacaaatgatggctaatcagggtatctga
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integrated database retrieval system
