KEGG   Penaeus chinensis (fleshy prawn): 125027170
Entry
125027170         CDS       T08118                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03082  ATP-dependent chromatin remodeling
pchn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125027170
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125027170
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pchn01009]
    125027170
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchn03021]
    125027170
   03036 Chromosome and associated proteins [BR:pchn03036]
    125027170
Protein phosphatases and associated proteins [BR:pchn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125027170
Transcription machinery [BR:pchn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125027170
    SWI/SNF complex
     125027170
Chromosome and associated proteins [BR:pchn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    125027170
   PBAF complex
    125027170
   SWI/SNF complex
    125027170
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 125027170
NCBI-ProteinID: XP_047472029
LinkDB
Position
7:complement(34157411..34165707)
AA seq 374 aa
MAKTYGDKPVSFQLEENGEFWCIGSEVGNYLRLFRGSLYKKFPGMYRRSITNDERKKLME
LGLTQHVLASNISLLRASEVEDIIEGNEDKYKAVSVRQQQDPEAAAASRAERQVKKPAAP
WVPTISNSSHLDAVPQATPINRNRIISKKIRTFPMCYDDLDPAQIHENSCQKEELVPIRL
DMEIEGQKLRDTFTWNRNEMLISPEQFAELLCDDLDLNPLMFVPAISTAIKQQVDQYPSQ
TIISEHSDTRIVIKLNIHVGNISLNDQFEWDMAEPENSPEDFATRLCSELGLGGEFVTAI
AYSVRGQLFWHQRTYAFSEAPLPVVEVPFRSQSEAEQWSPFLETLTDAEMEKKIRDQDRN
TRRMRRLANTTPVW
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggcgaagacttacggagacaagccagtgagctttcagcttgaggaaaatggcgaattt
tggtgtattgggtctgaggtgggcaactacctgcggttgttccgtgggtcactctacaag
aagttccctggcatgtacaggagatccataaccaatgatgagcgaaagaaattaatggaa
ttgggtctgacccagcacgtgttggcttctaacatttcactgctgagggcctctgaggtg
gaggacattattgaaggcaatgaggacaaatacaaagccgtgtcagtcaggcaacagcaa
gaccctgaggcagctgcagcaagcagagcagagaggcaggtgaagaagcctgcagccccc
tgggtccctactatctccaactcctcccacctcgatgccgtcccccaggccacccccatc
aacaggaacagaatcatttccaagaagatacgaacattccccatgtgctacgatgacctt
gacccagcacagatccacgagaactcctgccagaaggaggagcttgtccccatccgtctt
gacatggagattgaaggacagaaactcagggatactttcacttggaacagaaatgaaatg
ctcatcagtcccgagcaatttgcggagctcctgtgcgacgatttggacttgaaccccctc
atgttcgtgccagccatctcgactgccatcaaacagcaggtcgaccagtatccctcgcag
accatcatatccgaacactctgatacacgtattgtcattaagctaaacatccacgtgggc
aacatctcgctcaacgaccaattcgagtgggacatggccgagccagaaaactcccccgaa
gactttgcgacacgcctctgctctgagttgggtcttgggggggagttcgtgactgccatt
gcctactccgtccgcggacaactcttttggcaccagcgcacctatgccttcagcgaggcc
ccactgccagtggtggaggtgcccttccgatcccagagcgaggctgaacaatggtctcca
ttcctcgagacactcactgatgcagagatggagaagaagatcagggaccaggacagaaac
accaggagaatgcgacgactggcgaacacaaccccagtgtggtag

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