Penaeus chinensis (fleshy prawn): 125027390
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Entry
125027390 CDS
T08118
Name
(RefSeq) mutS protein homolog 4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125027390
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125027390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_16
ATPase_2
Motif
Other DBs
NCBI-GeneID:
125027390
NCBI-ProteinID:
XP_047472407
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All DBs
Position
7:complement(7063035..7077969)
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AA seq
1058 aa
AA seq
DB search
MAFVPLSLAKTPKYDVYSCSEVENCGRESDLARGVLGRGGVAGGRDGDGGRGSGGQIRPP
VYGAPAHSTPIFDFTPPHPAHLLTSGASLSLTQPARASCSSGPKRARGTRDSWSESAEIS
AVASRVSSASGEGEASGASSLFKTPRNDGRGRASRDKYPGRGRKRTPSWAGSKDASNGRF
RTPSTGRTTTLNSARSSCTPGSARSTAPSTRARPVPPSTIVAVAEGRGQARGEVGVAAID
LRRPHLSLAQFSDTHTYTRTLTKLTVLDPLEVVIASTAVDGAAGVGGASGLVRVLQESLA
EVSITAIQRRYFKDTRGLAIVKHLAAPHCAYVERHLATKYYCLASVAALMKYIECIQHVT
YAPHTLHVELSTSENTMSIEHSTCRKLELVRSLRGSWEDSLFGALRHTRTPGGTRLLRAS
LLQPHADVSTINARLNALQYLVDNPDLFYTLQSILGRFPDIDWLLSMCAQLHKEDTEQRC
ELRLNYVISLKNTLELLDPLATTLTGASDPLLDSVRQSVSRPDLQELLETLRGVMHEDAR
LVKGAAAMRAQRCYAIKSHVNGLLDVARKIYSEIIDDITAHVEELAKDHNVGMRVGHNAA
RGFHIAIPVPKRKSAPHLPPVFIKVQRGRGCITCTTEHLYLLDQRSRDTLREILIMSNVI
VSEMLIEARGRMGALHGLGEAIATLDLVVSLAHSAALGSWVRPEFSRALAIRCGRHPILD
VLAPTPPVPNNTFLSPESRVMVVTGPNMSGKSTYLRQIALIQVLAQTGSFVPAEFASLRV
VRHLFTHLGSEDSPENNASTFQVQMSDVAHMVGVAGSDSLVLLDELGSGTSVEEGGSLAW
AVMETLVHARATTVLATHALFLTKLPYLYPTVVNYHLESEDEGGGLLRLSHVVRRGVTQA
TRYGLALAAVTAMPPSVLRRSRHLANVMAPPTQVAVEEDAESLRYRAVYRLAHRLLALAN
AALPASSPPDDPLANCAALTPRASTLTALQPHSMDETASEASPREGAHDLTALSDARATE
LRTKLQCLLQDFMAQVSGGTQDAPQLSDDDGDGLQGLD
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgttcccttatcgcttgcaaaaacacccaaatatgatgtctactcgtgcagc
gaagtggagaattgcggccgagaaagtgacctcgctcgcggcgtcttgggtcgcggtggc
gtggctggagggcgtgacggtgacggaggccgagggagcgggggccagatcaggccccca
gtctacggagctcccgcccactcgacgcccatcttcgacttcacgccgccccaccccgcc
cacctgctgacctcaggggcgtcgctctccctgacccagcccgcccgcgccagctgctcc
tcgggcccaaagcgcgccagaggaacgagggactcctggtctgagtcggccgagatttct
gccgtcgcctccagggtgtcttctgcgagtggcgagggcgaggcgtccggagcgtctagc
ctctttaagactccgaggaacgatgggcgcgggcgggcttcgagggataagtaccccgga
cgtgggcgtaaaaggaccccctcgtgggcgggttcgaaggacgcctccaacgggcgcttc
aggacgccctccacggggcggacgacgacgctcaactcggcgcgctcctcctgcaccccc
gggtccgcccgctccacggcgccctccacccgcgcccggcccgtcccgccctcgaccatc
gtggcggtggcagaaggccgagggcaagcccgaggggaggtgggcgtggcggcaatagac
ctgcgacgcccacacctgtccctggcgcagttctcggacacccacacctacacgaggact
ctcactaagctgaccgtgctggatcccctggaggtagtgatagcgagcacggcggtggac
ggggctgcgggcgtgggcggggcgagcgggctggtccgagtcctgcaggagagcttggcg
gaggtctccatcacggccatccagcgtcgctacttcaaggacacccgcggcctcgccatc
gtcaagcacctcgcggcgcctcactgcgcctacgtcgagaggcacttggctacgaagtac
tactgcctcgcctcagtggccgccctcatgaagtacatagaatgcatccagcacgtgacg
tatgctccccacaccctccacgttgagctttccacctccgagaacaccatgagcattgag
cactccacttgccggaagctcgagttggtgcgaagtctccgcggcagctgggaggactcg
ctcttcggcgccctgcggcacacccggactccgggggggacgcgcctgctgcgcgcctcc
ctgctgcagccgcacgcagacgtctcaaccatcaacgcgcgtctaaatgctcttcagtat
ctggttgataaccccgacctcttctacacgctgcagagcattttagggaggtttccagac
atcgattggcttttatcaatgtgcgcacaacttcataaggaggacacggagcagcgttgt
gagcttcgtctgaactacgtgatctcgctgaagaacacccttgagctcctggaccccttg
gccaccaccctcaccggcgccagcgacccgctcctcgactccgtcaggcagagcgtgtcg
agacctgatctgcaggagctcctggagacgcttcggggcgtgatgcacgaggacgcccgc
ctggtcaagggcgccgccgccatgagggctcagcgctgttacgccatcaagagccacgtc
aacggcctgctggacgtcgctcgcaagatctactcggagatcatcgacgatatcacggcc
cacgtagaggagctcgccaaagatcacaacgtgggcatgagggttggccacaacgctgcc
cgcgggtttcacatcgccatcccggtaccgaagaggaagtcagcgcctcacctccctccc
gtgtttatcaaggtacagcgagggcgaggatgcatcacttgcacgacagaacatctttat
ttgctcgaccagcggtcccgtgacacactcagggagatactcatcatgagtaatgtgatc
gtgtcagagatgctgatagaggcgcgcgggcgtatgggcgcgctgcatggacttggggaa
gccatagccactttggatctggtggtatctctcgcccactcggccgccctcgggtcctgg
gtcagacccgagttctcccgcgcccttgccattcgctgtggcaggcacccgatcctggac
gtgcttgcgcctacgccgcccgtcccaaacaacacgttcttaagccctgagagccgggta
atggtagtgacaggaccgaatatgagtggcaagagcacctacctgcggcagatcgcgctc
attcaagtgctggctcagactggcagttttgtgccagcagaattcgcgtccctccgcgta
gtgcgtcatctgttcactcatttagggtccgaggattctccagaaaacaatgcgtccacc
ttccaagtacagatgagtgacgtggcgcacatggtgggcgtggcggggagcgattccctc
gtgctgctggacgaactcgggtcaggcacgagcgtcgaggaaggaggctctctcgcctgg
gccgtcatggagaccctcgtgcacgcccgcgccaccaccgtgctcgcaactcacgccctc
ttccttaccaagctcccgtacctctacccgacagtcgtgaactaccacctggagagcgag
gacgaagggggcggcctgctacgcctcagccacgtcgtccgtcggggggtcacccaggcc
acccgctacggcctcgccctcgccgcagtcacggccatgcctccttcggtgctgcggcga
tcccgacacctcgcgaacgtcatggcgccgccgacgcaggtcgcggtggaagaggacgcg
gagagcctacgataccgcgccgtgtatcgcctcgcacaccgccttctagctctggccaac
gccgccctgccagcctcgagtcctcccgacgacccactggctaactgtgcagctctgact
ccgcgcgcatccacgttgacggcccttcagccacacagcatggacgaaacagcgtcggaa
gcttccccacgagagggcgctcacgatctcacggctcttagcgatgctcgtgcgacggag
ctgaggaccaagctacagtgcctgctgcaggacttcatggcgcaggtgtccggcggcaca
caggacgcgcctcagctgtctgacgatgacggtgacggacttcaaggattagattaa
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