KEGG   Penaeus chinensis (fleshy prawn): 125027590
Entry
125027590         CDS       T08118                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125027590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchn03041]
    125027590
Spliceosome [BR:pchn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125027590
 Complex B
    125027590
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 125027590
NCBI-ProteinID: XP_047472650
LinkDB
Position
7:8578711..8609639
AA seq 659 aa
MATDVSTPLAQPMLSNGHNLMMNGEADPIQPAEKKMRVNEEGTARARSPLREVDQSGSLV
LGAGAKKDDIVHLLGQSLPRLSSDQKDAVARAKKYAMEQSIRLVLMKQTLAHQQQQAKSL
QRHQALVLMCRVYVGSISFELKEDTIRQAFVPFGPIKSINMSWDPVTQKHKGFAFVEYEM
PEAAQLALEQMNGVMIGGRNIKVGRPSNMPQNWSTAQGHSACDVAQPRQLMTRTTDGASI
MAQTVIDEITEEANYYNRIYIASVHQDLSETDIKSVFEAFGKIKQCMLTPGTTPGKHKGY
GFIEYENSQSAQEAIASMNLFDLGGQYLRVGKAITPPGSCYVSFGVNGPLSAPTQMPTAA
AVAAAAATAKIQAMDALATNAIGLVQGLSSSPNSMSQIPPVGVVGSVPPIGTVSSVSPVG
TVPPVGVVGGTPPVASVPPVGVVTSLPTNLGTSNSSGSAIPPPTVLTSLPVPGSSASSPA
PLPPATSNASTPSVAGSTPSSTSNASAVGGEDRKPTHQEELAKKLMEDNEPQTLQQQETM
SIKGQSARHLVMQKLMRKAESNVLILRNMVGAEEVDEQLQDEITEECGRFGTVNHVIIYQ
ERQSDEEDAEVIVKIFVEFANPHETSTAQEALNGRYFGGRLVKAELYDQNMYNHNDLSG
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggctaccgacgtgtccactccgctcgcccagccaatgcttagtaatggccataattta
atgatgaatggtgaagcagaccccattcaacctgctgagaagaaaatgagagttaatgaa
gaggggacagcacgagcgcggtctcccttgagagaagttgaccagtcgggcagtctcgtt
ctgggtgctggagcgaagaaagatgacatagtccacctcctgggacagagcctaccacgc
ctctcctccgatcagaaggatgcagttgcccgagccaagaaatatgccatggagcagtcc
atccgcctggttctcatgaagcagactctggcacaccaacagcagcaagcaaagtctcta
caaagacatcaagctctggtgttgatgtgccgtgtgtatgtggggagcatcagctttgag
ctaaaagaagatacaatacgtcaagcctttgttccctttggtccaatcaaatcaatcaac
atgtcgtgggacccagtgacacagaagcacaagggatttgcctttgttgagtacgagatg
ccagaggcggcacagcttgccttggaacagatgaacggagtgatgattggaggccgcaac
ataaaagttggacgcccatcaaacatgcctcagaattggtcgacagcacagggccatagt
gcctgtgatgttgcacaaccgagacagctaatgacaaggacaactgatggtgcaagtatt
atggcccagacggtaatagatgagatcacagaggaggcaaattattacaacagaatctac
attgcttctgtccatcaagacctctctgagactgacatcaagagtgtctttgaagccttt
ggcaaaattaagcaatgtatgttaacgccaggaaccacaccgggcaaacacaagggctat
ggatttattgaatatgaaaattcacaatctgcacaggaagccatagcttccatgaactta
tttgacttgggtggacagtatttgcgtgttgggaaagcaattactcctccaggatcatgt
tatgtgagttttggtgttaatggtcccttatcagcaccaacacaaatgccaactgcagcg
gcagtggcagctgcagctgcaactgcaaagattcaagctatggatgcccttgcaacaaat
gcaatcggcctagttcaggggctaagtagctctcccaactcaatgtcccagataccccct
gtgggtgtagtaggtagtgtaccccccatagggacagtaagcagtgtttccccagtggga
acagtgccacctgtgggtgttgttggaggaacaccacctgttgcttctgtcccccctgtg
ggtgtggtcactagcctaccaaccaacctagggacatctaactcttctgggtctgccatt
ccacctccaacagtcctcacgtctctacctgttcctggatcctcagcatcttctccagcc
ccactgccccctgcaacttcaaatgcttcaacaccaagtgttgcaggatcaactccgagc
tcaacttcaaatgcatcagctgtcggtggtgaagatcgcaagcccacacatcaagaagaa
ttggctaagaagttgatggaagacaatgagccacaaacattacaacagcaggaaaccatg
tcaattaaaggacagtctgctcgacatcttgttatgcaaaaactaatgagaaaagctgag
tcaaatgtcttaatcctacgcaacatggttggagcagaagaagttgatgagcagctgcaa
gatgaaatcactgaagaatgtggacggtttggaactgtcaaccatgtcattatctatcaa
gaaaggcagtctgatgaagaggatgcagaagtcattgtcaaaatctttgtggagtttgca
aatccccatgaaacatctacagcacaagaagccttaaatggacgatactttggtggtcgg
ctagttaaagcagagttgtatgaccagaacatgtataatcacaatgatttgtcagggtga

DBGET integrated database retrieval system