Penaeus chinensis (fleshy prawn): 125027928
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Entry
125027928 CDS
T08118
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04137
Mitophagy - animal
pchn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125027928
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125027928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125027928
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
125027928
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125027928
Multi subunit type E3
ERAD complex
125027928
LMBR1L-GP78-UBAC2 complex
125027928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4_2
G2BR
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
RING_XB3-XBAT31
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125027928
NCBI-ProteinID:
XP_047473037
LinkDB
All DBs
Position
8:complement(38377083..38407266)
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AA seq
672 aa
AA seq
DB search
MPVVLDRLPLPNLTWYTGLSVLLLSCSVYYAGVQVALNPNWKEKLLEKNNVSENHHQQEE
GEVSLYHVLDLEGASQEREMTPYLIPEIISFMFHEPLCIWTLINMAYCILILLGTLIQRL
VFGELRVSEQQHIKDKFWNFVFYKFIFVFGVMNVQAMDEVVLWCSWFSVLGFLHLLAQLC
KDRFEYLSFSATTPRRTHVRLLGLLGIILTLATFCLLICVVVGCHSGINTFAFMVAECIL
LIVRTLYVITRYSIYLWDITHEGLWEKRGRYVYMTELVFELSELVIDMVHHIHMLVWGNM
FLTMASLVICMQLRLLFYQLQHKVKSHRNYLRVLQLMNMYPEISGMDILSEESTCAICWE
HLETGRRLPCTHLFHASCLLAWLHQDLSCPTCRHKLHKPEQNEVASLSGTLLNGLLPAGE
ENDLRDDSGVGDVPHGAGGAFPSHAAPEGSPGTPGWRYVSWLPSFSVEQSHTQLPRHHQP
NSQPASTSQLDNLARQVQQMFPDVSYSDILEDLQHTHSLEVTIDNILEQRLVNPPPMFAS
HDGPSPVFDVQKEDEKSHQRLSEQEETKEEEEDFVDASPTPSRPLSLPVPFELDAATTED
PSDTESEGSGIGVGISGAGGRFSKSPQEREQMLAQRKTELLSQARRRFVSKPKGMVNGME
NSQTDCDSIADS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtgttagacagactacccttgcccaacctcacgtggtacactgggctgagt
gtcctgctgctctcgtgttccgtgtactatgccggggtacaggtggccctcaaccccaac
tggaaggagaaactgctcgagaagaacaatgtctccgagaatcatcatcagcaggaggaa
ggcgaggtgtccctctaccatgtcctcgacctggagggtgcctcgcaggagagggagatg
acgccctacctcatcccagagatcatcagcttcatgttccacgagcccctgtgcatttgg
accttaatcaatatggcctactgcatactcatcctactgggcaccctaatccagcgcctt
gtcttcggggagctcagggtgtctgagcaacagcacatcaaagacaagttctggaatttc
gtgttctacaaattcatctttgtctttggcgtcatgaatgtgcaggccatggatgaagta
gtgctctggtgctcctggttcagcgtcctgggtttcctgcacctccttgcacaactctgc
aaagaccgctttgaatatttatccttctcggccacaactccgcgcaggacgcatgtgcgg
ctcttggggctcctgggcattattcttaccctggcaactttctgcctgttgatctgcgtt
gttgtgggatgtcattcgggcataaacacgtttgctttcatggtggcggagtgtatactc
ttgatagtgagaaccctgtatgtgataacccggtacagcatctatttatgggacatcacc
cacgagggactttgggaaaagagagggaggtatgtgtacatgacggagctggttttcgaa
ctaagcgagctggtgatcgacatggtgcatcatatccacatgttggtatgggggaatatg
ttcctgactatggcttctcttgtgatatgtatgcagttgcgactcctcttctaccagctg
cagcacaaagtcaagtcacacaggaactaccttagggtgctccagctcatgaacatgtac
ccagaaatttctggcatggacattctgtcggaggagagcacgtgtgccatatgctgggag
catctagaaacaggcaggagactaccttgcacacatcttttccatgcctcttgcctgctg
gcatggctgcatcaagatctttcatgtccaacatgcagacacaaattgcacaaaccagaa
cagaatgaagttgcttctctgtctggaacacttctcaatgggcttttacctgctggagag
gagaatgaccttcgggatgacagtggtgtaggagacgttcctcatggcgctggaggtgca
ttcccttctcatgctgcccctgagggctcaccaggtactccaggctggcggtatgtgtcc
tggctacctagcttcagtgtagagcagagccacacacaattaccacgccatcaccagccc
aactctcagcctgcgtctacatctcagcttgacaatcttgctagacaggtccaacagatg
ttcccagatgtctcatattcagatatattggaagatcttcagcacacccacagcctagag
gtgacaattgacaacatcctggagcagcgtttagtcaaccctccgcctatgtttgcgtca
catgatggtcccagcccagtgtttgatgtacagaaagaggatgaaaagagccaccagcga
ttgagtgagcaggaagagacaaaggaggaggaggaagattttgtagacgcatctcctact
ccctcacggcccctgagcctgccggtgccctttgagttagatgcagccaccacagaggat
ccaagtgacacagagtctgaaggaagtggcataggtgttggaatctctggagccggtgga
cggtttagcaaatcaccccaagagcgagagcagatgctggctcagcgcaaaactgaatta
ctgtcacaagcccgccgacgttttgtgtccaagccaaaggggatggttaatggtatggag
aattcacaaacagactgtgatagcatagcagactcctga
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