KEGG   Penaeus chinensis (fleshy prawn): 125027935
Entry
125027935         CDS       T08118                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125027935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pchn04121]
    125027935
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125027935
Ubiquitin system [BR:pchn04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     125027935
   Cul5 complex
     125027935
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125027935
SSDB
Motif
Pfam: ubiquitin Dehyd-heme_bind Rad60-SLD Ubiquitin_2 Ubiquitin_4
Other DBs
NCBI-GeneID: 125027935
NCBI-ProteinID: XP_047473061
LinkDB
Position
8:39439261..39450375
AA seq 117 aa
MDVFLMVRRKKTTIFTDAKETTTVRELKKIIQGIMKVEPENQQLMNERGTEIFDDDKQLS
DYNLSAQTARAQSPATVALVFRQENGDFEPLDITPLSSPPELPEVMKPQEPQTHDLN
NT seq 354 nt   +upstreamnt  +downstreamnt
atggatgtgtttttgatggtacggaggaagaagactacaatcttcacagatgccaaggaa
acaacaacagtcagggagttaaagaaaataatacaaggaattatgaaagttgaacccgag
aaccagcagctaatgaacgaacgtgggacagaaatattcgacgatgacaaacagctcagc
gactacaatctatcggcccagacagcacgagctcagagtcctgctactgttgcacttgta
tttaggcaggaaaatggagattttgagccacttgatatcacacctttatcatccccccct
gagctgcccgaagtgatgaaacctcaggaacctcaaactcacgaccttaattga

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