Penaeus chinensis (fleshy prawn): 125028002
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Entry
125028002 CDS
T08118
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125028002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125028002
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125028002
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125028002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125028002
NCBI-ProteinID:
XP_047473203
LinkDB
All DBs
Position
8:complement(5027999..5044281)
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AA seq
448 aa
AA seq
DB search
MNLGIMGSLGGTVARSIESRGIASGPSVGSLVSSGSGSSGGSSLAALSSAVAATQNTNSL
FMANSIQTATQQRAVTDMLRHMQGLGLNLHDLLYAEQCDSLLFRNRSITGIVGRPYGSGG
NSMMGLHSNFGGDSAPPPLDLSEFPSLSSRSTDNSQPNPMAGRQPYVGMVKQPTPETSEF
TMSSEDFPALPGTQSTPTGKIFSPFSDDGGFSNNDKKSTSAASSESSSDFSLRVAEKRES
MRRGIQTRADGKVTNIPGDMVTDQFGMVGLLTFIRAAETDHQLVSLALGSDLTTLGLNLN
SPENLYPNFGGPWAETPCRPQDIDYHVPQEYLTNQQIRGKLAPVKFDRYGEDLLFYMFYS
NAGDVLQILAGSELYNRDWRYHKDERVWITRAPGMAPVEKGPNFERGTYFYFDAQNWRKV
PKEFHLEYDKLEERPHIPGGITSTSSTL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggtattatggggagtttaggcggcactgttgccagaagcatcgagagtcgt
ggtattgcaagcggtccgagcgtcggaagtcttgtcagcagcggcagtggtagctcagga
ggttccagcctggcagccctgtcctcagctgtggcagcaacacaaaatacaaattctctc
tttatggcaaacagtattcagactgcaacacagcagcgagcagtcaccgatatgcttaga
catatgcagggtctagggttgaacttgcatgatttactttatgctgagcaatgcgacagt
ctcttatttagaaaccgtagtataacaggaattgtggggagaccctatggaagtggcggc
aatagtatgatgggtctccacagtaattttggtggggactcggccccacctccattggac
ctgtcagaattcccttccttatcttcccgaagtaccgataactcccagcctaaccctatg
gctggaagacaaccttatgtgggaatggtgaaacagccaactcccgagacctctgaattc
actatgagtagtgaggactttccagcattgccaggaacgcaatctactccaactgggaaa
atcttctcaccgttttcagatgacggggggttctcaaacaatgataaaaagtctacctcg
gcggcaagttcagaatcatcgtcggacttctccctacgggtagcagagaagagagaatct
atgaggagaggaattcaaactcgtgccgacggtaaagtaacaaacatacctggagacatg
gtgacggaccagttcgggatggtgggtcttttaacgtttatcagagcagcagaaacggac
caccaactcgtatcattggcattagggtcagacttaaccaccttagggttaaatctgaat
tcccctgaaaatctctaccctaattttggtggcccttgggcagaaaccccctgccgtcct
caggatatagattatcatgttccgcaagaatacttaactaatcagcaaatcagagggaag
ttagcacctgtaaagtttgacagatatggagaggatttgctcttctacatgttttactcc
aatgcaggagatgtactacaaatattggctggttcagagctgtacaaccgggactggaga
tatcataaagatgaacgagtatggataactagagccccaggcatggcaccagtggaaaag
ggtcctaactttgaacgtggaacttacttctattttgatgcccagaattggaggaaagtg
ccaaaggaattccatcttgagtacgacaagttggaagagcgcccgcacatccctggtggc
atcacatcgacttcatctaccctgtga
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