Penaeus chinensis (fleshy prawn): 125028011
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Entry
125028011 CDS
T08118
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125028011
03015 mRNA surveillance pathway
125028011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125028011
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125028011
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125028011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TAFA
AAA_30
DUF2511
Motif
Other DBs
NCBI-GeneID:
125028011
NCBI-ProteinID:
XP_047473223
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All DBs
Position
8:complement(4621610..4636759)
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AA seq
480 aa
AA seq
DB search
MGDDWAKAAEEQEAKDLASKVQTLSIPEDGSSAKPAPATEAEETPSEASTEEALTAAEES
LMRKVMRKGIIESKNNVEVYRKDPNNPLYSVKDFEALNLRKELLDGIYDMGFKLPSKIQE
TALPTLLADPPLNMIAQSQSGTGKTAAFSLAMLSRIDPKKRCPQALCLSPTLELALQTLE
SITKMGKKCTDIAIRAAVKGETVARGQCVNEHIVVGTPGKVLDWVKKYKCLDLSQCRVFV
LDEADVMIATQGHQDQSVRIHKHLPSTCQMMLFSATYEDQVVEFAEAIIPSPVIIRLHRN
EETLENIRQMYVECKNEEEKYLAISNIYTIPVGNSMFFCHTKRSASSLASRLKQDGHQVA
LLTGDLTPDERVRVLTRYREGQERVLICTNVLARGIDVESVNLVVNYDLPVKPGSREADC
ETYLHRIGRTGRFGKTGNAINIVEGRSDILILKEIESHFNIKIEKLDYNNVEEIEKLGED
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgactgggctaaggccgcggaggaacaagaggccaaagatctcgcctcgaag
gttcagaccctgagcattccagaggatggcagcagtgccaaaccagctccagccacagag
gctgaggaaacacccagtgaggcctcaacggaggaggcgctcacagcagctgaggagtct
ctcatgcgcaaggtgatgcgcaagggcatcatcgagtccaagaacaatgtggaggtttat
cggaaggatcccaataacccactgtactctgtgaaggactttgaggcattgaacctgcga
aaggagctgctggatggcatatatgacatgggcttcaagttgccctccaagatccaggag
acagctttgcccacacttcttgctgacccgcctctgaacatgattgctcagtcacagtcg
gggacaggcaagacagcagccttctcactggctatgcttagtaggattgacccaaagaag
aggtgccctcaggctctctgcttgtcccccacactggagctggcccttcagacacttgag
tcgatcaccaagatgggcaagaaatgtactgatatcgccatccgtgctgctgtgaaggga
gaaacggtggcaagaggccagtgtgtgaatgagcacattgtggtggggacaccaggcaag
gtgctggactgggtcaagaagtacaagtgcctagatctgagccagtgcagggtgtttgtg
ctggatgaagctgacgtcatgattgccacgcagggacatcaggaccagtcagtgcggatc
cacaagcacctcccctccacctgccagatgatgttgttctctgctacctatgaggatcag
gtagtggaatttgctgaggccatcatacccagcccagtcatcatccgtcttcacaggaat
gaggagacactagagaacattcgtcagatgtacgtggagtgtaaaaatgaggaggagaaa
tacctggccatctcaaatatctacaccatcccagttggcaactccatgttcttctgccat
accaagcgaagtgctagttccttggcctcgcgtttgaaacaggatgggcaccaggttgca
ctgctgacaggtgacttgacaccagatgagagggtcagagtacttactcgttaccgtgag
ggccaagaacgtgtcctcatctgcaccaatgtccttgctcgtggcattgacgttgaatcg
gtcaacttagtagtaaactatgacctgccagttaagcctggctcacgagaggctgattgt
gaaacttacctccaccgcatcggtcgcacaggaaggtttggcaagactggcaatgccatt
aacattgtggaaggacgcagcgacatcctcatcttaaaggagatcgagagccacttcaat
attaagattgagaaattagactacaacaatgttgaagaaattgaaaagcttggggaagac
tag
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